3bnf: Difference between revisions

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New page: left|200px<br /><applet load="3bnf" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bnf, resolution 1.70Å" /> '''W. succinogenes NrfA...
 
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[[Image:3bnf.jpg|left|200px]]<br /><applet load="3bnf" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:3bnf.jpg|left|200px]]
caption="3bnf, resolution 1.70&Aring;" />
 
'''W. succinogenes NrfA Sulfite Complex'''<br />
{{Structure
|PDB= 3bnf |SIZE=350|CAPTION= <scene name='initialview01'>3bnf</scene>, resolution 1.70&Aring;
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+513'>AC1</scene>, <scene name='pdbsite=AC2:So3+Binding+Site+For+Residue+A+1'>AC2</scene>, <scene name='pdbsite=AC3:Y1+Binding+Site+For+Residue+A+2'>AC3</scene>, <scene name='pdbsite=AC4:Y1+Binding+Site+For+Residue+A+3'>AC4</scene>, <scene name='pdbsite=AC5:Y1+Binding+Site+For+Residue+A+4'>AC5</scene>, <scene name='pdbsite=AC6:Act+Binding+Site+For+Residue+A+5'>AC6</scene>, <scene name='pdbsite=AC7:Act+Binding+Site+For+Residue+A+6'>AC7</scene>, <scene name='pdbsite=AC8:Hem+Binding+Site+For+Residue+A+508'>AC8</scene>, <scene name='pdbsite=AC9:Hem+Binding+Site+For+Residue+A+509'>AC9</scene>, <scene name='pdbsite=BC1:Hem+Binding+Site+For+Residue+A+510'>BC1</scene>, <scene name='pdbsite=BC2:Hem+Binding+Site+For+Residue+A+511'>BC2</scene> and <scene name='pdbsite=BC3:Hem+Binding+Site+For+Residue+A+512'>BC3</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene>, <scene name='pdbligand=Y1:YTTRIUM+ION'>Y1</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene> and <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2]
|GENE=
}}
 
'''W. succinogenes NrfA Sulfite Complex'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
3BNF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes] with <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=SO3:'>SO3</scene>, <scene name='pdbligand=Y1:'>Y1</scene>, <scene name='pdbligand=ACT:'>ACT</scene> and <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] Known structural/functional Sites: <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+513'>AC1</scene>, <scene name='pdbsite=AC2:So3+Binding+Site+For+Residue+A+1'>AC2</scene>, <scene name='pdbsite=AC3:Y1+Binding+Site+For+Residue+A+2'>AC3</scene>, <scene name='pdbsite=AC4:Y1+Binding+Site+For+Residue+A+3'>AC4</scene>, <scene name='pdbsite=AC5:Y1+Binding+Site+For+Residue+A+4'>AC5</scene>, <scene name='pdbsite=AC6:Act+Binding+Site+For+Residue+A+5'>AC6</scene>, <scene name='pdbsite=AC7:Act+Binding+Site+For+Residue+A+6'>AC7</scene>, <scene name='pdbsite=AC8:Hem+Binding+Site+For+Residue+A+508'>AC8</scene>, <scene name='pdbsite=AC9:Hem+Binding+Site+For+Residue+A+509'>AC9</scene>, <scene name='pdbsite=BC1:Hem+Binding+Site+For+Residue+A+510'>BC1</scene>, <scene name='pdbsite=BC2:Hem+Binding+Site+For+Residue+A+511'>BC2</scene> and <scene name='pdbsite=BC3:Hem+Binding+Site+For+Residue+A+512'>BC3</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNF OCA].  
3BNF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNF OCA].  


==Reference==
==Reference==
Binding and Reduction of Sulfite by Cytochrome c Nitrite Reductase(,)., Lukat P, Rudolf M, Stach P, Messerschmidt A, Kroneck PM, Simon J, Einsle O, Biochemistry. 2008 Feb 19;47(7):2080-2086. Epub 2008 Jan 18. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18201106 18201106]
Binding and Reduction of Sulfite by Cytochrome c Nitrite Reductase(,)., Lukat P, Rudolf M, Stach P, Messerschmidt A, Kroneck PM, Simon J, Einsle O, Biochemistry. 2008 Feb 19;47(7):2080-2086. Epub 2008 Jan 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18201106 18201106]
[[Category: Nitrite reductase (cytochrome; ammonia-forming)]]
[[Category: Nitrite reductase (cytochrome; ammonia-forming)]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: transport]]
[[Category: transport]]


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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:00:12 2008''