Sigma factor: Difference between revisions

Line 44:

**[[2mao]] – EcSF region 2 - NMR

**[[1tty]] – TmSF-70 region 4 – ''Thermotoga maritima''

**[[~~1tty~~]] – TmSF-70 region 1.1 (mutant) - NMR

**[[2k6x]] – TmSF-70 region 1.1 (mutant) - NMR

**[[2ahq]] – AaSF-54 C terminal – ''Aquifex aeolicus'' - NMR

**[[2k9l]], [[2k9m]] – AaSF-54 core domain - NMR

**[[3mzy]] – SF-H – ''Fusobacterium nucleatum''

**[[1h3l]] – SF N terminal – ''Streptomyces coelicolor''

*Sigma factor complex with DNA

Line 55:

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**[[2h27]] – EcSF-E region 4 + DNA

**[[2map]] – EcSF region 2 + DNA - NMR

**[[1ku7]] – EcSF region 4 (mutant) + DNA

**[[2o8k]], [[2o9l]] – AaSF-54 C terminal + DNA - NMR

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**[[3hug]] – MtSF + membrane protein – ''Mycobacterium tuberculosis''

**[[4nqw]] – MtSF-K region 4 + anti-σ factor

**[[3wod]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus''

**[[4x8k]] – MtSF-A region 2 + RBPA

**[[4mq9]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic

**[[3wod]], [[2a6e]], [[2cw0]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus''

**[[4mq9]], [[2a68]], [[2a69]], [[2a6h]], [[3dxj]], [[3eql]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic

**[[2be5]] – TtSF + RNAP subunits α,β,β’,ω + inhibitor

**[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω

**[[4mex]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic

**[[4yg2]] – EcSF-70 + RNAP subunits α,β,β’,ω

**[[4mex]], [[4kmu]], [[4kn4]], [[4kn7]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic

**[[4mey]], [[4ljz]], [[4lk1]] – EcSF-70 + RNAP subunits α,β,β’,ω

**[[4lk0]], [[4llg]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor

**[[4lk0]], [[4llg]], [[4yfk]], [[4yfn]], [[4yfx]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor

**[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''

**[[4g6d]], [[4g8x]], [[4g94]] – SF-70 region 4 + Orf067 – ''Staphylococcus aureus''

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Line 85:

**[[1rio]] - TaSF region 4 + repression protein CI + DNA

**[[4oin]], [[4oip]], [[4oiq]], [[4oir]] – TtSF-A + RNAP subunits α,β,β’,ω + antibiotic + DNA

**[[4oio]] – TtSF-A + RNAP subunits α,β,β’,ω + DNA

**[[4oio]], [[4g7h]], [[4g7o]], [[4g7z]], [[4q4z]], [[4q5s]] – TtSF-A + RNAP subunits α,β,β’,ω + DNA

**[[1smy]] – TtSF + RNAP subunits α,β,β’,ω + G4P

**[[3n97]] – TaSF region 4 + RNAP subunits α + DNA

**[[1l9u]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM

**[[1l9u]], [[1l9z]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM

**[[3iyd]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + catabolite gene activator + DNA

**[[4jk1]], [[4jk2]], [[4jkr]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + G4P

**[[4yln]], [[4ylo]], [[4ylp]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + DNA

}}

== References ==

@@ Line 44: / Line 44: @@
 **[[2mao]] – EcSF region 2 - NMR<br />
 **[[1tty]] – TmSF-70 region 4 – ''Thermotoga maritima''<br />
-**[[1tty]] – TmSF-70 region 1.1 (mutant) - NMR<br />
+**[[2k6x]] – TmSF-70 region 1.1 (mutant) - NMR<br />
 **[[2ahq]] – AaSF-54 C terminal – ''Aquifex aeolicus'' - NMR<br />
 **[[2k9l]], [[2k9m]] – AaSF-54 core domain - NMR<br />
 **[[3mzy]] – SF-H – ''Fusobacterium nucleatum''<br />
+**[[1h3l]] – SF N terminal – ''Streptomyces coelicolor''<br />
 *Sigma factor complex with DNA
@@ Line 55: / Line 56: @@
 **[[2h27]] – EcSF-E region 4 + DNA<br />
 **[[2map]] – EcSF region 2 + DNA - NMR<br />
+**[[1ku7]] – EcSF region 4 (mutant) + DNA <br />
 **[[2o8k]], [[2o9l]] – AaSF-54 C terminal + DNA - NMR<br />
@@ Line 67: / Line 69: @@
 **[[3hug]] – MtSF + membrane protein – ''Mycobacterium tuberculosis''<br />
 **[[4nqw]] – MtSF-K region 4 + anti-σ factor<br />
-**[[3wod]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br />
+**[[4x8k]] – MtSF-A region 2 + RBPA<br />
-**[[4mq9]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br />
+**[[3wod]], [[2a6e]], [[2cw0]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br />
+**[[4mq9]], [[2a68]], [[2a69]], [[2a6h]], [[3dxj]], [[3eql]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br />
+**[[2be5]] – TtSF + RNAP subunits α,β,β’,ω + inhibitor<br />
 **[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω<br />
-**[[4mex]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br />
+**[[4yg2]] – EcSF-70 + RNAP subunits α,β,β’,ω  <br />
+**[[4mex]], [[4kmu]], [[4kn4]], [[4kn7]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br />
 **[[4mey]], [[4ljz]], [[4lk1]] – EcSF-70 + RNAP subunits α,β,β’,ω <br />
-**[[4lk0]], [[4llg]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor<br />
+**[[4lk0]], [[4llg]], [[4yfk]], [[4yfn]], [[4yfx]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor<br />
 **[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''<br />
 **[[4g6d]], [[4g8x]], [[4g94]] – SF-70 region 4 + Orf067 – ''Staphylococcus aureus''<br />
@@ Line 80: / Line 85: @@
 **[[1rio]] - TaSF region 4 + repression protein CI + DNA<br />
 **[[4oin]], [[4oip]], [[4oiq]], [[4oir]] – TtSF-A + RNAP subunits α,β,β’,ω + antibiotic + DNA<br />
-**[[4oio]] – TtSF-A + RNAP subunits α,β,β’,ω + DNA<br />
+**[[4oio]], [[4g7h]], [[4g7o]], [[4g7z]], [[4q4z]], [[4q5s]] – TtSF-A + RNAP subunits α,β,β’,ω + DNA<br />
+**[[1smy]] – TtSF + RNAP subunits α,β,β’,ω + G4P<br />
 **[[3n97]] – TaSF region 4 + RNAP subunits α + DNA<br />
-**[[1l9u]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM  <br />
+**[[1l9u]], [[1l9z]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM  <br />
 **[[3iyd]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + catabolite gene activator + DNA<br />
+**[[4jk1]], [[4jk2]], [[4jkr]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + G4P<br />
+**[[4yln]], [[4ylo]], [[4ylp]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + DNA<br />
 }}
 == References ==

Sigma factor: Difference between revisions

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