Caffeine: Difference between revisions
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<Structure load='4UHR' size='350' frame='true' align='right' caption='Agonist Bound to A2A Receptor' scene='' /> | <Structure load='4UHR' size='350' frame='true' align='right' caption='Agonist Bound to A2A Receptor' scene='' /> | ||
A2A is a | The adenosine receptor (A2A) is a G-protein, which is a transmembrane protein that consists of secondary structures, such as seven alpha helical domains. Inside the third and seventh transmembrane helical domains, there are hydrophobic side chains that are required for ligand recognition. The target ligand, adenosine, is a large, polar molecule that binds to the extracellular binding domain of the A2A receptor by several nonpolar interactions. To be specific, these nonpolar interactions include hydrogen bonding (11), aromatic stacking interactions (1), and many van der Waals interactions (Xu et. al, 2011). To avoid the steric interactions between the ribose ring of adenosine and the tryptophan of the enzyme binding pocket, these nonpolar interactions cause conformational changes within the binding cavity, and cause an internal rotation and tilt of the seventh helical domain (Xu et. al, 2011). Other molecules, such as caffeine can also bind to these adenosine receptors. When caffeine binds to this receptor, it inhibits adenosine from binding to the extracellular binding domain of the A2A receptor. | ||
== Mechanism of Caffeine Synthesis == | == Mechanism of Caffeine Synthesis == | ||