User:Eric Martz/Introduction to Structural Bioinformatics 2016: Difference between revisions
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*Be sure to note the '''4-character PDB code''' of the molecule you choose. The PDB code makes it easy to retrieve the molecule and information about it. Here are some ways to find a protein with known structure: | *Be sure to note the '''4-character PDB code''' of the molecule you choose. The PDB code makes it easy to retrieve the molecule and information about it. Here are some ways to find a protein with known structure: | ||
# Atlas of Macromolecules ([http://atlas.molviz.org Atlas.MolviZ.Org]). Choose a "Straightforward" or "Challenging" (not "Enormous") molecule that has protein and ligand. | # Atlas of Macromolecules ([http://atlas.molviz.org Atlas.MolviZ.Org]). Choose a "Straightforward" or "Challenging" (not "Enormous") molecule that has protein and ligand. | ||
# [http:// | # [http://pdb101.rcsb.org/motm/motm-by-category Molecule of the Month] at the PDB. To get a PDB code, scroll to the bottom of an article and look for the boxes ''Discussed Structures''. | ||
# [http://proteopedia.org/wiki/index.php/Topic_pages Topic Pages] in Proteopedia, or its [http://proteopedia.org/wiki/index.php/Table_of_Contents Table of Contents]. | # [http://proteopedia.org/wiki/index.php/Topic_pages Topic Pages] in Proteopedia, or its [http://proteopedia.org/wiki/index.php/Table_of_Contents Table of Contents]. | ||
# Random PDB Entry in Proteopedia (see ''Random'' at top left of this page in the ''navigation'' box). | # Random PDB Entry in Proteopedia (see ''Random'' at top left of this page in the ''navigation'' box). | ||
