1dze: Difference between revisions

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|PDB= 1dze |SIZE=350|CAPTION= <scene name='initialview01'>1dze</scene>, resolution 2.5&Aring;
|PDB= 1dze |SIZE=350|CAPTION= <scene name='initialview01'>1dze</scene>, resolution 2.5&Aring;
|SITE= <scene name='pdbsite=AC1:Ret+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:L1p+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC3</scene>, <scene name='pdbsite=AC4:L3p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC4</scene>, <scene name='pdbsite=AC5:L4p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC5</scene> and <scene name='pdbsite=AC6:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC6</scene>
|SITE= <scene name='pdbsite=AC1:Ret+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:L1p+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC3</scene>, <scene name='pdbsite=AC4:L3p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC4</scene>, <scene name='pdbsite=AC5:L4p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC5</scene> and <scene name='pdbsite=AC6:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC6</scene>
|LIGAND= <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=L1P:3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL'>L1P</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=L3P:2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3&#39;-SN-GLYCEROL-1&#39;-PHOSPHATE'>L3P</scene> and <scene name='pdbligand=L4P:3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL'>L4P</scene>
|LIGAND= <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:GLUCOSE'>GLC</scene>, <scene name='pdbligand=L1P:3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL'>L1P</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=L3P:2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3&#39;-SN-GLYCEROL-1&#39;-PHOSPHATE'>L3P</scene>, <scene name='pdbligand=L4P:3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL'>L4P</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>
|ACTIVITY=  
|ACTIVITY=  
|GENE=  
|GENE=  
|DOMAIN=
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dze OCA], [http://www.ebi.ac.uk/pdbsum/1dze PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1dze RCSB]</span>
}}
}}


Line 28: Line 31:
[[Category: Takeda, K.]]
[[Category: Takeda, K.]]
[[Category: Yamane, T.]]
[[Category: Yamane, T.]]
[[Category: L1P]]
[[Category: L2P]]
[[Category: L3P]]
[[Category: L4P]]
[[Category: RET]]
[[Category: bacteriorhodopsin]]
[[Category: bacteriorhodopsin]]
[[Category: halobacteria]]
[[Category: halobacteria]]
Line 44: Line 42:
[[Category: sliding]]
[[Category: sliding]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 11:34:56 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:51:53 2008''

Revision as of 16:51, 30 March 2008

File:1dze.gif


Drag the structure with the mouse to rotate
1dze, resolution 2.5Å
Sites: AC1, AC2, AC3, AC4, AC5 and AC6
Ligands: GAL, GLC, L1P, L2P, L3P, L4P, MAN, RET
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



STRUCTURE OF THE M INTERMEDIATE OF BACTERIORHODOPSIN TRAPPED AT 100K


About this Structure

1DZE is a Single protein structure of sequence from Halobacterium salinarum. The following page contains interesting information on the relation of 1DZE with [Bacteriorhodopsin]. Full crystallographic information is available from OCA.

Page seeded by OCA on Sun Mar 30 19:51:53 2008

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