5i2b: Difference between revisions

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'''Unreleased structure'''


The entry 5i2b is ON HOLD
==Crystal structure of a peptide deformylase from Burkholderia ambifaria with actinonin==
 
<StructureSection load='5i2b' size='340' side='right' caption='[[5i2b]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5i2b]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I2B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5I2B FirstGlance]. <br>
Description: Crystal structure of a peptide deformylase from Burkholderia ambifaria with actinonin
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BB2:ACTINONIN'>BB2</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5hgw|5hgw]]</td></tr>
[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5i2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i2b OCA], [http://pdbe.org/5i2b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i2b RCSB], [http://www.ebi.ac.uk/pdbsum/5i2b PDBsum]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/B1FPK4_9BURK B1FPK4_9BURK]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163]
__TOC__
</StructureSection>
[[Category: Peptide deformylase]]
[[Category: Structural genomic]]
[[Category: Burkholderia ambifaria]]
[[Category: Hydrolase]]
[[Category: Ssgcid]]
Retrieved from "https://proteopedia.org/5i2b"