Sandbox Reserved 1176: Difference between revisions

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On the extracellular side of the protein is the
On the extracellular side of the protein is the
<scene name='72/721547/Hydrophobic_binding_pocket/5'>hydrophobic binding pocket</scene>. <ref name="SONT"/>
<scene name='72/721547/Hydrophobic_binding_pocket/5'>hydrophobic binding pocket</scene>. <ref name="SONT"/>
One key residue in this pocket is a Phenylalanine at position 358, which takes part in a network of hydrophobic stacking interactions. <ref name="SPGP/> These interactions stabilize the Trp321 and Tyr324 residues allowing Tyr324 to interact with the '''[https://en.wikipedia.org/wiki/C-terminus C-terminal]'''  
One key residue in this pocket is a Phenylalanine at position 358, which takes part in a network of hydrophobic stacking interactions. <ref name="SPGP"/> These interactions stabilize the Trp321 and Tyr324 residues allowing Tyr324 to interact with the '''[https://en.wikipedia.org/wiki/C-terminus C-terminal]'''  
<scene name='72/721547/Ligand_protein_interactions/7'>Leu13 residue of the NTS ligand</scene>
<scene name='72/721547/Ligand_protein_interactions/7'>Leu13 residue of the NTS ligand</scene>
via '''[https://en.wikipedia.org/wiki/Van_der_Waals_force Van der Waals interactions]''' .<ref name="SONT"/><ref name="SPGP"/>
via '''[https://en.wikipedia.org/wiki/Van_der_Waals_force Van der Waals interactions]''' .<ref name="SONT"/><ref name="SPGP"/>

Revision as of 00:33, 22 April 2016

An interactive view of the class A GPCR, NTSR1 (blue). This protein gets its activity from binding to the 13 amino acid ligand, NTS (red).

Drag the structure with the mouse to rotate

References