5cx0: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
==Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae, in complex with fragment 322== | |||
<StructureSection load='5cx0' size='340' side='right' caption='[[5cx0]], [[Resolution|resolution]] 2.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5cx0]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CX0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CX0 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=56L:5-(PROPAN-2-YL)-2-THIOXODIHYDROPYRIMIDINE-4,6(1H,5H)-DIONE'>56L</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr> | |||
[[Category: | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5cp0|5cp0]], [[5cpd|5cpd]], [[5cvk|5cvk]], [[5cvp|5cvp]], [[5cvq|5cvq]], [[5cwx|5cwx]], [[5cwy|5cwy]], [[5cxj|5cxj]], [[5cy7|5cy7]], [[5cy8|5cy8]]</td></tr> | ||
[[Category: Kang, L | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> | ||
[[Category: Ngo, H | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cx0 OCA], [http://pdbe.org/5cx0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cx0 RCSB], [http://www.ebi.ac.uk/pdbsum/5cx0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cx0 ProSAT]</span></td></tr> | ||
</table> | |||
== Function == | |||
[[http://www.uniprot.org/uniprot/Q5H3Z2_XANOR Q5H3Z2_XANOR]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Peptide deformylase]] | |||
[[Category: Kang, L W]] | |||
[[Category: Ngo, H P.T]] | |||
[[Category: Fragment]] | |||
[[Category: Hydrolase]] | |||
[[Category: Metallopeptidase]] | |||
[[Category: Peptide deformyase]] | |||
[[Category: Xanthomona]] | |||
Revision as of 04:12, 4 August 2016
Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae, in complex with fragment 322
| ||||||||||||
