1ofm: Difference between revisions

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|PDB= 1ofm |SIZE=350|CAPTION= <scene name='initialview01'>1ofm</scene>, resolution 1.80&Aring;
|PDB= 1ofm |SIZE=350|CAPTION= <scene name='initialview01'>1ofm</scene>, resolution 1.80&Aring;
|SITE= <scene name='pdbsite=AC1:Gc4+Binding+Site+For+Chain+A'>AC1</scene>
|SITE= <scene name='pdbsite=AC1:Gc4+Binding+Site+For+Chain+A'>AC1</scene>
|LIGAND= <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene> and <scene name='pdbligand=MXZ:6-DEOXY-2-O-METHYL-ALPHA-L-GALACTOPYRANOSE'>MXZ</scene>
|LIGAND= <scene name='pdbligand=ASG:2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE'>ASG</scene>, <scene name='pdbligand=BDP:BETA-D-GALACTOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=DGC:D-GLUCURONIC+ACID'>DGC</scene>, <scene name='pdbligand=GCU:D-GLUCURONIC+ACID'>GCU</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MXZ:6-DEOXY-2-O-METHYL-ALPHA-L-GALACTOPYRANOSE'>MXZ</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>, <scene name='pdbligand=RAM:RHAMNOSE'>RAM</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Transferred_entry:_4.2.2.20 Transferred entry: 4.2.2.20], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.4 4.2.2.4]  
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Chondroitin-sulfate-ABC_endolyase Chondroitin-sulfate-ABC endolyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.20 4.2.2.20] </span>
|GENE=  
|GENE=  
|DOMAIN=
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ofm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ofm OCA], [http://www.ebi.ac.uk/pdbsum/1ofm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ofm RCSB]</span>
}}
}}


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==Reference==
==Reference==
The structure of chondroitin B lyase complexed with glycosaminoglycan oligosaccharides unravels a calcium-dependent catalytic machinery., Michel G, Pojasek K, Li Y, Sulea T, Linhardt RJ, Raman R, Prabhakar V, Sasisekharan R, Cygler M, J Biol Chem. 2004 Jul 30;279(31):32882-96. Epub 2004 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15155751 15155751]
The structure of chondroitin B lyase complexed with glycosaminoglycan oligosaccharides unravels a calcium-dependent catalytic machinery., Michel G, Pojasek K, Li Y, Sulea T, Linhardt RJ, Raman R, Prabhakar V, Sasisekharan R, Cygler M, J Biol Chem. 2004 Jul 30;279(31):32882-96. Epub 2004 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15155751 15155751]
[[Category: Chondroitin-sulfate-ABC endolyase]]
[[Category: Pedobacter heparinus]]
[[Category: Pedobacter heparinus]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Transferred entry: 4 2.2 20]]
[[Category: Cygler, M.]]
[[Category: Cygler, M.]]
[[Category: Michel, G.]]
[[Category: Michel, G.]]
[[Category: BGC]]
[[Category: GLA]]
[[Category: MXZ]]
[[Category: active site]]
[[Category: active site]]
[[Category: beta-elimination]]
[[Category: beta-elimination]]
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[[Category: lyase]]
[[Category: lyase]]


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