5ey3: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 5ey3 ~~is ON HOLD until Paper Publication~~

==X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with cytidine and sulphate==

~~Authors~~: ~~Balaev, V~~.V., ~~Lashkov~~, A.A., ~~Gabdulkhakov~~, A.G., ~~Betzel~~, C., ~~Mikhailov~~, A.M.

== Structural highlights ==

<table><tr><td colspan='2'>[[5ey3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EY3 OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EY3 FirstGlance].

~~Description~~: ~~X-ray structure~~ of the ~~thymidine phosphorylase from Salmonella typhimurium~~ in ~~complex with cytidine~~ and ~~sulphate~~

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=CTN:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE'>CTN</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>

[[Category: ~~Unreleased Structures~~]]

<tr id='related'><td class="sblockLbl">[[Related_structure|Related:]]</td><td class="sblockDat">[[4xr5|4xr5]]</td></tr>

[[Category: ~~Gabdulkhakov~~, ~~A.G~~]]

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ey3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ey3 OCA], [http://pdbe.org/5ey3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ey3 RCSB], [http://www.ebi.ac.uk/pdbsum/5ey3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ey3 ProSAT]</td></tr>

</table>

== Function ==

[[http://www.uniprot.org/uniprot/TYPH_SALTY TYPH_SALTY]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.

__TOC__

</StructureSection>

[[Category: Thymidine phosphorylase]]

[[Category: Balaev, V V]]

[[Category: Betzel, C]]

[[Category: ~~Mikhailov~~, A.M]]

[[Category: Gabdulkhakov, A G]]

[[Category: Lashkov, A.A]]

[[Category: Lashkov, A A]]

[[Category: ~~Balaev~~, ~~V.V~~]]

[[Category: Mikhailov, A M]]

[[Category: Metabolism]]

[[Category: Nucleoside]]

[[Category: Transferase]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5ey3 is ON HOLD  until Paper Publication
+==X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with cytidine and sulphate==
+<StructureSection load='5ey3' size='340' side='right' caption='[[5ey3]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
-Authors: Balaev, V.V., Lashkov, A.A., Gabdulkhakov, A.G., Betzel, C., Mikhailov, A.M.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5ey3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EY3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EY3 FirstGlance]. <br>
-Description: X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with cytidine and sulphate
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CTN:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE'>CTN</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4xr5|4xr5]]</td></tr>
-[[Category: Gabdulkhakov, A.G]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ey3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ey3 OCA], [http://pdbe.org/5ey3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ey3 RCSB], [http://www.ebi.ac.uk/pdbsum/5ey3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ey3 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/TYPH_SALTY TYPH_SALTY]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.
+__TOC__
+</StructureSection>
+[[Category: Thymidine phosphorylase]]
+[[Category: Balaev, V V]]
 [[Category: Betzel, C]]
-[[Category: Mikhailov, A.M]]
+[[Category: Gabdulkhakov, A G]]
-[[Category: Lashkov, A.A]]
+[[Category: Lashkov, A A]]
-[[Category: Balaev, V.V]]
+[[Category: Mikhailov, A M]]
+[[Category: Metabolism]]
+[[Category: Nucleoside]]
+[[Category: Transferase]]