5kii: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 5kii is ~~ON HOLD~~ ~~until Paper Publication~~

==PSEUDO T4 LYSOZYME MUTANT - Y88PHE-METHYL==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[5kii]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KII OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KII FirstGlance].

~~Description~~:

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=HED:2-HYDROXYETHYL+DISULFIDE'>HED</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>

[[Category: ~~Unreleased Structures~~]]

<tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=4PH:4-METHYL-L-PHENYLALANINE'>4PH</scene></td></tr>

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kii OCA], [http://pdbe.org/5kii PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kii RCSB], [http://www.ebi.ac.uk/pdbsum/5kii PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kii ProSAT]</td></tr>

</table>

== Function ==

[[http://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4]] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Lysozyme]]

[[Category: Scholfield, M R]]

[[Category: Halogen bond]]

[[Category: Hydrolase]]

[[Category: T4 lysozyme]]

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-'''Unreleased structure'''
-The entry 5kii is ON HOLD  until Paper Publication
+==PSEUDO T4 LYSOZYME MUTANT - Y88PHE-METHYL==
+<StructureSection load='5kii' size='340' side='right' caption='[[5kii]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5kii]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KII OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KII FirstGlance]. <br>
-Description:
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HED:2-HYDROXYETHYL+DISULFIDE'>HED</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=4PH:4-METHYL-L-PHENYLALANINE'>4PH</scene></td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5khz|5khz]], [[5ki1|5ki1]], [[5ki2|5ki2]], [[5ki3|5ki3]], [[5ki8|5ki8]], [[5kig|5kig]], [[5kim|5kim]], [[5kio|5kio]]</td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kii OCA], [http://pdbe.org/5kii PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kii RCSB], [http://www.ebi.ac.uk/pdbsum/5kii PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kii ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4]] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Lysozyme]]
+[[Category: Scholfield, M R]]
+[[Category: Halogen bond]]
+[[Category: Hydrolase]]
+[[Category: T4 lysozyme]]