1yrj: Difference between revisions

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|PDB= 1yrj |SIZE=350|CAPTION= <scene name='initialview01'>1yrj</scene>, resolution 2.7&Aring;
|PDB= 1yrj |SIZE=350|CAPTION= <scene name='initialview01'>1yrj</scene>, resolution 2.7&Aring;
|SITE=  
|SITE=  
|LIGAND= <scene name='pdbligand=AM2:APRAMYCIN'>AM2</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene> and <scene name='pdbligand=MG:MAGNESIUM ION'>MG</scene>
|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=AM2:APRAMYCIN'>AM2</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
|ACTIVITY=  
|ACTIVITY=  
|GENE=  
|GENE=  
|DOMAIN=
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yrj OCA], [http://www.ebi.ac.uk/pdbsum/1yrj PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yrj RCSB]</span>
}}
}}


Line 26: Line 29:
[[Category: Wall, D.]]
[[Category: Wall, D.]]
[[Category: Zhao, Q.]]
[[Category: Zhao, Q.]]
[[Category: AM2]]
[[Category: K]]
[[Category: MG]]
[[Category: apramycin-rna complex]]
[[Category: apramycin-rna complex]]
[[Category: crystal structure]]
[[Category: crystal structure]]
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[[Category: rna complex]]
[[Category: rna complex]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:26:38 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:19:20 2008''

Revision as of 22:19, 30 March 2008

File:1yrj.gif


Drag the structure with the mouse to rotate
1yrj, resolution 2.7Å
Ligands: A, AM2, C, G, K, MG, U
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Crystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotide


About this Structure

1YRJ is a Protein complex structure of sequences from [1]. Full crystallographic information is available from OCA.

Reference

Molecular recognition by glycoside pseudo base pairs and triples in an apramycin-RNA complex., Han Q, Zhao Q, Fish S, Simonsen KB, Vourloumis D, Froelich JM, Wall D, Hermann T, Angew Chem Int Ed Engl. 2005 Apr 29;44(18):2694-700. PMID:15849690

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