5m9u: Difference between revisions

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'''Unreleased structure'''


The entry 5m9u is ON HOLD
==Spatial structure of antimicrobial peptide arenicin-1 mutant V8R==
<StructureSection load='5m9u' size='340' side='right' caption='[[5m9u]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5m9u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arema Arema]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M9U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M9U FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m9u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m9u OCA], [http://pdbe.org/5m9u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m9u RCSB], [http://www.ebi.ac.uk/pdbsum/5m9u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m9u ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/ANN1_AREMA ANN1_AREMA]] Has antimicrobial activity against the Gram-negative bacteria E.coli and P.mirabilis, the Gram-positive bacterium L.monocytogenes and the yeast C.albicans.<ref>PMID:15527787</ref> <ref>PMID:17935487</ref> 
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The beta-hairpin antimicrobial peptides arenicins from marine polychaeta Arenicola marina exhibit a broad spectrum of antimicrobial activity and high cytotoxicity. In this study the biological activities of arenicin-1 and its therapeutically valuable analog Ar-1[V8R] were investigated. The peptide Ar-1[V8R] displays significantly reduced cytotoxicity against mammalian cells relative to the wild-type arenicin-1. At the same time, both peptides exhibit similar antibacterial activities and kinetics of bacterial membrane permeabilization. Comparative NMR analysis of the peptides spatial structures in water and membrane-mimicking environment showed that Ar-1[V8R] in contrast to arenicin has significantly lower dimerization propensity. Thus, dimerization of the antimicrobial peptide arenicin plays a key role in the cytotoxicity but not in the antibacterial activity.


Authors: Myshkin, M.Y., Shenkarev, Z.O., Panteleev, P.V., Ovchinnikova, T.V.
Dimerization of the antimicrobial peptide arenicin plays a key role in the cytotoxicity but not in the antibacterial activity.,Panteleev PV, Myshkin MY, Shenkarev ZO, Ovchinnikova TV Biochem Biophys Res Commun. 2017 Jan 22;482(4):1320-1326. doi:, 10.1016/j.bbrc.2016.12.035. Epub 2016 Dec 8. PMID:27940358<ref>PMID:27940358</ref>


Description: Spatial structure of antimicrobial peptide arenicin-1 mutant V8R
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Myshkin, M.Y]]
<div class="pdbe-citations 5m9u" style="background-color:#fffaf0;"></div>
[[Category: Ovchinnikova, T.V]]
== References ==
[[Category: Shenkarev, Z.O]]
<references/>
[[Category: Panteleev, P.V]]
__TOC__
</StructureSection>
[[Category: Arema]]
[[Category: Myshkin, M Y]]
[[Category: Ovchinnikova, T V]]
[[Category: Panteleev, P V]]
[[Category: Shenkarev, Z O]]
[[Category: Antimicrobial protein]]
[[Category: Structure from cyana 3 97]]

Revision as of 04:41, 16 November 2017

Spatial structure of antimicrobial peptide arenicin-1 mutant V8R

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