Sandbox Reserved 1440: Difference between revisions

From Proteopedia
Jump to navigationJump to search
No edit summary
No edit summary
Line 12: Line 12:
Validaton report guidelines.
Validaton report guidelines.
<b>Rfree</b> - measures the fit of the model using a subset of the data available.
<b>Rfree</b> - measures the fit of the model using a subset of the data available.
<b>RSRZ outliers</b> - Real Space R values, measures fit of atomic model vs. the collected data in real space.
<b>RSRZ outliers</b> - Real Space R values, measures fit of atomic model vs. the collected data in real space.
Clashscore - Derived from number of atoms in the model that are unusually close together.
 
Ramachandran outliers - Measures φ (phi) and ψ (psi) angle irregularities.
<b>Clashscore</b> - Derived from number of atoms in the model that are unusually close together.
Sidechain outliers - Measures protein sidechain outliers and deviations from expected backbone angles.
 
<b>Ramachandran outliers</b> - Measures φ (phi) and ψ (psi) angle irregularities.
 
<b>Sidechain outliers</b> - Measures protein sidechain outliers and deviations from expected backbone angles.