Pho4: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Michal Harel (talk | contribs)
No edit summary
mNo edit summary
Line 6: Line 6:
Phosphate system positive regulatory protein '''Pho4''' is a transcriptional activator which regulates the expression of phosphatase under conditions of phosphate starvation<ref>PMID:2220078</ref>.  For details see [[Pho4 bHLH Protein]].
Phosphate system positive regulatory protein '''Pho4''' is a transcriptional activator which regulates the expression of phosphatase under conditions of phosphate starvation<ref>PMID:2220078</ref>.  For details see [[Pho4 bHLH Protein]].
*<scene name='72/725407/Cv/2'>Yeast Pho4 DNA-binding domain interactions with DNA</scene>.
*<scene name='72/725407/Cv/2'>Yeast Pho4 DNA-binding domain interactions with DNA</scene>.
Its structure is a basic basic helix-loop-helix (bHLH) [1]
The pho4 protein takes part in transcription of several yeast genes related to phosphate metabolism:
PH05- encoding repressible acid phosphatase [2]
PH08-encoding alkaline phosphatase [2]
PH081-a regulatory gene [3]
PH084- phosphate permease gene [4]


</StructureSection>
</StructureSection>
==sturcture==
The structure of the Pho4 protein is a basic Helix-loop-helix(bHLH) , The linker sequence between Helix1(H1) and Helix2(H2)  contains several residues:  Asn,  Glu, Pro and Ser[6]. The DNA binding site is a homodimer and two monomers in a left‐handed four‐helix bundle fold (identical to bHLH/Zip and bHLH proteins fold) [7].
[[loop structure]]
Pho4 loops (conserved structure?) are long but compact and forms a short alpha-helical structure [5]. The PHO4 loop contains a Trp residue that faces the aromatic rings of Tyr52 and His55 of helix H2, and Pro28 of H2 and H1.an aromatic cluster forms a cap structure is observed.


== 3D Structures of lactoferrin ==
== 3D Structures of lactoferrin ==
Line 18: Line 32:
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic –Page]]

Revision as of 12:13, 19 March 2018

Yeast Pho4 DNA-binding domain complex with DNA (PDB code 1a0a)

Drag the structure with the mouse to rotate

sturcture

The structure of the Pho4 protein is a basic Helix-loop-helix(bHLH) , The linker sequence between Helix1(H1) and Helix2(H2) contains several residues: Asn, Glu, Pro and Ser[6]. The DNA binding site is a homodimer and two monomers in a left‐handed four‐helix bundle fold (identical to bHLH/Zip and bHLH proteins fold) [7].

Pho4 bHLH Protein Pho4 loops (conserved structure?) are long but compact and forms a short alpha-helical structure [5]. The PHO4 loop contains a Trp residue that faces the aromatic rings of Tyr52 and His55 of helix H2, and Pro28 of H2 and H1.an aromatic cluster forms a cap structure is observed.


3D Structures of lactoferrin

Updated on 19-March-2018

1a0a – yPho4 DNA-binding domain + DNA - yeast
3w3x – yPho4 peptide + importin subunit b-3

References

Proteopedia Page Contributors and Editors (what is this?)

Inbar Yaffe, Michal Harel, Alexander Berchansky, Joel L. Sussman