Jmol/Visualizing membrane position: Difference between revisions
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:2. A <scene name='78/784276/Opm2/3'>translucent cylinder</scene> represents membrane near the protein. If desired, <scene name='78/784276/Opm2/6'>the ends of the cylinder can be colored similarly to the pseudoatoms</scene>. | :2. A <scene name='78/784276/Opm2/3'>translucent cylinder</scene> represents membrane near the protein. If desired, <scene name='78/784276/Opm2/6'>the ends of the cylinder can be colored similarly to the pseudoatoms</scene>. | ||
<scene name='78/784276/Opm2/7'>When we apply</scene> a <font color="# | <scene name='78/784276/Opm2/7'>When we apply</scene> a <font color="#909090"><b>hydrophobic</b></font> vs. <font color="magenta"><b>polar</b></font> color scheme, the protein within the lipid bilayer is seen to have a largely hydrophobic surface. The example used here is [[5lil]]. | ||
==Methods== | |||
(Methods to be added here) | (Methods to be added here) | ||
