2ibk: Difference between revisions

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|PDB= 2ibk |SIZE=350|CAPTION= <scene name='initialview01'>2ibk</scene>, resolution 2.25&Aring;
|PDB= 2ibk |SIZE=350|CAPTION= <scene name='initialview01'>2ibk</scene>, resolution 2.25&Aring;
|SITE=  
|SITE=  
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
|LIGAND= <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7]  
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span>
|GENE= dbh, dpo4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])
|GENE= dbh, dpo4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])
|DOMAIN=
|RELATEDENTRY=[[2ia6|2IA6]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ibk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ibk OCA], [http://www.ebi.ac.uk/pdbsum/2ibk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ibk RCSB]</span>
}}
}}


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[[Category: Xing, G.]]
[[Category: Xing, G.]]
[[Category: Yagi, H.]]
[[Category: Yagi, H.]]
[[Category: BAP]]
[[Category: CA]]
[[Category: EDO]]
[[Category: GOL]]
[[Category: POP]]
[[Category: benzo pyrene]]
[[Category: benzo pyrene]]
[[Category: carcinogen]]
[[Category: carcinogen]]
Line 36: Line 34:
[[Category: translesion synthesis]]
[[Category: translesion synthesis]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:27:32 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:42:04 2008''

Revision as of 00:42, 31 March 2008

File:2ibk.gif


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2ibk, resolution 2.25Å
Ligands: BAP, CA, DA, DC, DG, DT, EDO, GOL, POP
Gene: dbh, dpo4 (Sulfolobus solfataricus)
Activity: DNA-directed DNA polymerase, with EC number 2.7.7.7
Related: 2IA6


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap


About this Structure

2IBK is a Single protein structure of sequence from Sulfolobus solfataricus. Full crystallographic information is available from OCA.

Page seeded by OCA on Mon Mar 31 03:42:04 2008

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