2isi: Difference between revisions

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==Crystal structure of Ape1 from Homo sapiens in a new crystal form complexed with a ligand==

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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-(apurinic_or_apyrimidinic_site)_lyase DNA-(apurinic or apyrimidinic site) lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.99.18 4.2.99.18] </span></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2isi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2isi OCA], [http://pdbe.org/2isi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2isi RCSB], [http://www.ebi.ac.uk/pdbsum/2isi PDBsum]</span></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2isi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2isi OCA], [http://pdbe.org/2isi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2isi RCSB], [http://www.ebi.ac.uk/pdbsum/2isi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2isi ProSAT]</span></td></tr>

</table>

== Function ==

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Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/2isi_consurf.spt"</scriptWhenChecked>

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/2isi_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2isi ConSurf].

==See Also==

*[[Apurinic-Apyrimidinic Endonuclease-1|Apurinic-Apyrimidinic Endonuclease-1]]

*[[DNA polymerase|DNA polymerase]]

== References ==

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@@ Line 1: / Line 1: @@
 ==Crystal structure of Ape1 from Homo sapiens in a new crystal form complexed with a ligand==
 <StructureSection load='2isi' size='340' side='right' caption='[[2isi]], [[Resolution|resolution]] 2.76&Aring;' scene=''>
@@ Line 6: / Line 7: @@
 <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1hd7|1hd7]], [[1e9n|1e9n]], [[1dew|1dew]], [[1de9|1de9]], [[1de8|1de8]]</td></tr>
 <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-(apurinic_or_apyrimidinic_site)_lyase DNA-(apurinic or apyrimidinic site) lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.99.18 4.2.99.18] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2isi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2isi OCA], [http://pdbe.org/2isi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2isi RCSB], [http://www.ebi.ac.uk/pdbsum/2isi PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2isi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2isi OCA], [http://pdbe.org/2isi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2isi RCSB], [http://www.ebi.ac.uk/pdbsum/2isi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2isi ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 14: / Line 15: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/2isi_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/2isi_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2isi ConSurf].
 <div style="clear:both"></div>
 ==See Also==
 *[[Apurinic-Apyrimidinic Endonuclease-1|Apurinic-Apyrimidinic Endonuclease-1]]
-*[[DNA polymerase|DNA polymerase]]
 == References ==
 <references/>