2oq4: Difference between revisions
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|PDB= 2oq4 |SIZE=350|CAPTION= <scene name='initialview01'>2oq4</scene>, resolution 2.60Å | |PDB= 2oq4 |SIZE=350|CAPTION= <scene name='initialview01'>2oq4</scene>, resolution 2.60Å | ||
|SITE= <scene name='pdbsite=AC1:Ped+Binding+Site+For+Residue+D+427'>AC1</scene>, <scene name='pdbsite=AC2:Ped+Binding+Site+For+Residue+F+427'>AC2</scene>, <scene name='pdbsite=AC3:Zn+Binding+Site+For+Residue+A+501'>AC3</scene>, <scene name='pdbsite=AC4:Zn+Binding+Site+For+Residue+B+501'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+A+601'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+B+602'>AC6</scene> and <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+B+603'>AC7</scene> | |SITE= <scene name='pdbsite=AC1:Ped+Binding+Site+For+Residue+D+427'>AC1</scene>, <scene name='pdbsite=AC2:Ped+Binding+Site+For+Residue+F+427'>AC2</scene>, <scene name='pdbsite=AC3:Zn+Binding+Site+For+Residue+A+501'>AC3</scene>, <scene name='pdbsite=AC4:Zn+Binding+Site+For+Residue+B+501'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+A+601'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+B+602'>AC6</scene> and <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+B+603'>AC7</scene> | ||
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand= | |LIGAND= <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PED:PENTANE-3,4-DIOL-5-PHOSPHATE'>PED</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= Nei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | |GENE= Nei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
|DOMAIN= | |||
|RELATEDENTRY=[[2ea0|2EA0]], [[2opf|2OPF]] | |||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oq4 OCA], [http://www.ebi.ac.uk/pdbsum/2oq4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2oq4 RCSB]</span> | |||
}} | }} | ||
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[[Category: Shoahm, G.]] | [[Category: Shoahm, G.]] | ||
[[Category: Zharkov, D O.]] | [[Category: Zharkov, D O.]] | ||
[[Category: base excision]] | [[Category: base excision]] | ||
[[Category: covalent intermediate]] | [[Category: covalent intermediate]] | ||
| Line 32: | Line 32: | ||
[[Category: reaction mechanism]] | [[Category: reaction mechanism]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:21:32 2008'' | ||
Revision as of 01:21, 31 March 2008
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| 2oq4, resolution 2.60Å | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sites: | AC1, AC2, AC3, AC4, AC5, AC6 and AC7 | ||||||||||||
| Ligands: | DA, DC, DG, DT, NA, PED, SO4, ZN | ||||||||||||
| Gene: | Nei (Escherichia coli) | ||||||||||||
| Related: | 2EA0, 2OPF
| ||||||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||||||
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (E2Q) in complex with AP-site containing DNA substrate
About this Structure
2OQ4 is a Protein complex structure of sequences from Escherichia coli. Full crystallographic information is available from OCA.
Page seeded by OCA on Mon Mar 31 04:21:32 2008
