Introduction to molecular visualization: Difference between revisions

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Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, Bureaucrats, journal, Administrators
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Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, Bureaucrats, journal, Administrators
30,122 edits
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# [[Jmol/Visualizing membrane position|Lipid bilayer boundaries]] for integral membrane proteins.
# [[Jmol/Visualizing membrane position|Lipid bilayer boundaries]] for integral membrane proteins.


The above features can be most easily displayed in the ''Views'' tab of [[FirstGlance in Jmol]]. Evolutionary conservation can sometimes be seen with [[How to see conserved regions|one click in Proteopedia]], or in other cases requires [[ConSurf Quick Analysis Procedure|submitting a job to the ConSurf server]]. For a specific protein, such features can be displayed by using Proteopedia's [[Scene Authoring Tools]] and then attached to green links when authoring a page.
Features 1-4 can be most easily displayed in the ''Views'' tab of [[FirstGlance in Jmol]]. Evolutionary conservation can sometimes be seen with [[How to see conserved regions|one click in Proteopedia]], or in other cases requires [[ConSurf Quick Analysis Procedure|submitting a job to the ConSurf server]]. Methods for visualizing lipid bilayer boundaries for integral membrane proteins are given in [[Jmol/Visualizing membrane position]].
 
For a specific protein, such features can be displayed by using Proteopedia's [[Scene Authoring Tools]] and then attached to green links when authoring a page.


===Covalent and Non-Covalent Interactions===
===Covalent and Non-Covalent Interactions===
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