Jmol/Visualizing membrane position: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) No edit summary |
Eric Martz (talk | contribs) No edit summary |
||
| Line 17: | Line 17: | ||
You can download the pseudoatom-enhanced PDB file from the server, and then [[Help:Uploading_molecules|upload it to Proteopedia]] for use in a ''Molecular Scene''. | You can download the pseudoatom-enhanced PDB file from the server, and then [[Help:Uploading_molecules|upload it to Proteopedia]] for use in a ''Molecular Scene''. | ||
In the case of 5LiL, I had difficulty getting the pseudoatoms to show from a green link (even though they displayed in the [[SAT]]). In the PDB file, the pseudoatoms followed a MASTER record. I deleted the MASTER record and all CONECT records, and then I got the scene shown, using [[Image:5lil_opm2.pdb]]. | In the case of 5LiL, I had difficulty getting the pseudoatoms to show from a green link (even though they displayed in the [[SAT]]). In the [[PDB file]], the pseudoatoms followed a MASTER record. I deleted the MASTER record and all CONECT records, and then I got the scene shown, using [[Image:5lil_opm2.pdb]]. | ||
* [http://FirstGlance.Jmol.Org/fg.htm?mol=http%3A//proteopedia.org/wiki/images/d/da/5lil_opm2.pdb View 5lil_opm2.pdb in FirstGlance in Jmol] | * [http://FirstGlance.Jmol.Org/fg.htm?mol=http%3A//proteopedia.org/wiki/images/d/da/5lil_opm2.pdb View 5lil_opm2.pdb in FirstGlance in Jmol] | ||
