Structure superposition tools: Difference between revisions
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===Jmol=== | ===Jmol=== | ||
Since this article was researched and written in 2010, a new ''compare'' command was implemented in Jmol that does structural alignment. See | Since this article was researched and written in 2010, a new ''compare'' command was implemented in Jmol that does structural alignment. See | ||
* [[Superposition with jmol]] | * [[Superposition with jmol]] which explains the method in Jmol. | ||
* [[Samatey/1#Comparison]] which shows an animation of alignment performed by Jmol. | * [[Samatey/1#Comparison]] which shows an animation of alignment performed by Jmol. | ||
* [[Samatey/2#Comparison_with_Thermotoga]] which has buttons that animate the alignments of different domains. | * [[Samatey/2#Comparison_with_Thermotoga]] which has buttons that animate the alignments of different domains. | ||
* [[Samatey/3#Comparison_with_Salmonella]]: the button ''Animate Structural Alignment'' plays a long "movie script", but in August 2018 that appears to hang in the middle. This problem may have arisen when Proteopedia was converted to use JSmol. | |||
===PyMOL=== | ===PyMOL=== | ||
