2z55: Difference between revisions
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==Bacterioruberin in the trimeric structure of archaerhodopsin-2== | ==Bacterioruberin in the trimeric structure of archaerhodopsin-2== | ||
<StructureSection load='2z55' size='340' side='right' caption='[[2z55]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='2z55' size='340' side='right' caption='[[2z55]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2z55]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[2z55]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Halobacterium_sp._aus-2 Halobacterium sp. aus-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Z55 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=22B:BACTERIORUBERIN'>22B</scene>, <scene name='pdbligand= | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=22B:BACTERIORUBERIN'>22B</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ei4|2ei4]], [[1vgo|1vgo]], [[1uaz|1uaz]], [[1iw6|1iw6]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ei4|2ei4]], [[1vgo|1vgo]], [[1uaz|1uaz]], [[1iw6|1iw6]]</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2z55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z55 OCA], [http://pdbe.org/2z55 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2z55 RCSB], [http://www.ebi.ac.uk/pdbsum/2z55 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2z55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z55 OCA], [http://pdbe.org/2z55 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2z55 RCSB], [http://www.ebi.ac.uk/pdbsum/2z55 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2z55 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z55_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z55_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Halobacterium sp. aus-2]] | ||
[[Category: Kouyama, T]] | [[Category: Kouyama, T]] | ||
[[Category: Yoshimura, K]] | [[Category: Yoshimura, K]] | ||
