3gbd: Difference between revisions

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==Crystal structure of the isomaltulose synthase SmuA from Protaminobacter rubrum==
==Crystal structure of the isomaltulose synthase SmuA from Protaminobacter rubrum==
<StructureSection load='3gbd' size='340' side='right' caption='[[3gbd]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='3gbd' size='340' side='right' caption='[[3gbd]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3gbd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/'protaminobacter_rubrum' 'protaminobacter rubrum']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GBD FirstGlance]. <br>
<table><tr><td colspan='2'>[[3gbd]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GBD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gbe|3gbe]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gbe|3gbe]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">smuA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=126825 'Protaminobacter rubrum'])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomaltulose_synthase Isomaltulose synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.11 5.4.99.11] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomaltulose_synthase Isomaltulose synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.11 5.4.99.11] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gbd OCA], [http://pdbe.org/3gbd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gbd RCSB], [http://www.ebi.ac.uk/pdbsum/3gbd PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gbd OCA], [http://pdbe.org/3gbd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gbd RCSB], [http://www.ebi.ac.uk/pdbsum/3gbd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gbd ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/3gbd_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/3gbd_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Protaminobacter rubrum]]
[[Category: Isomaltulose synthase]]
[[Category: Isomaltulose synthase]]
[[Category: Aghajari, N]]
[[Category: Aghajari, N]]
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[[Category: Glycoside hydrolase]]
[[Category: Glycoside hydrolase]]
[[Category: Isomerase]]
[[Category: Isomerase]]
[[Category: Protaminobacter rubrum]]
[[Category: Sucrose isomerase]]
[[Category: Sucrose isomerase]]
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