Chaperonin: Difference between revisions

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</StructureSection>
</StructureSection>
== 3D Structures of Chaperonin ==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
*'''Group I'''
*''Large subunit''
**[[3m6c]] – MtGroEL1 apical domain – ''Mycobacterium tuberculosis''<BR />
**[[1sjp]], [[3rtk]] – MtGroEL2 residues 42-539<BR />
**[[2eu1]], [[4v43]], [[1oel]], [[1grl]], [[2yey]], [[4wsc]], [[4wgl]], [[5opw]] – EcGroEL (mutant) - ''Escherichia coli''<BR />
**[[3e76]], [[2nwc]], [[1xck]], [[1ss8]], [[4hel]] – EcGroEL<BR />
**[[3c9v]], [[3cau]], [[2ynj]], [[5w0s]] – EcGroEL – Cryo EM<BR />
**[[2c7e]], [[1gr5]], [[4aaq]] - EcGroEL (mutant) – Cryo EM<BR />
**[[1dk7]], [[1la1]] - EcGroEL apical domain<br />
**[[1fy9]], [[1fya]], [[1kid]], [[1jon]], [[3vz6]], [[3vz7]], [[3vz8]] – EcGroEL apical domain (mutant) <BR />
**[[1srv]] – TtCPN60 apical domain - ''Thermus thermophilus''<BR />
**[[3osx]] - CPN60 apical domain – ''Xenorhabdus nematophila''<br />
**[[1iok]] – CPN60 – ''Paracoccus denitrificans''<br />
**[[5da8]] - GroEL – ''Chlorobium tepidum''<br />
**[[5cdk]], [[5cdj]], [[5cdi]] - GroEL apical domain – ''Chlamydomonas reinhardtii''<br />
*''Large subunit binary complex''
**[[1kp8]] - EcGroEL (mutant) + ATP<BR />
**[[4aar]], [[4aas]], [[4aau]], [[4ab2]], [[4ab3]] - EcGroEL (mutant) + ATP – Cryo EM<br />
**[[1sx3]] - EcGroEL + ATP<BR />
**[[1sx4]] - EcGroEL + ADP<BR />
**[[4ki8]] - EcGroEL (mutant) + ADP<br />
**[[1mnf]] – EcGroEL + polypeptide<BR />
**[[2cgt]] – EcGroEL + capsid assbly protein GP31 – EM<BR />
**[[1dkd]] - EcGroEL apical domain + polypeptide<br />
**[[4pj1]] - GroEL + ADP – human<br />
*''Small subunit''
**[[3nx6]] – GroES residues 40-134 (mutant) – ''Xanthomonas oryzae''<BR />
**[[1wnr]] – TtCPN10 residues 1-94<BR />
**[[1p3h]], [[1hx5]] – MtCPN10<BR />
**[[1p82]], [[1p83]] - MtCPN10 residues 1-25 - NMR<BR />
**[[1egs]] - GroES residues 19-27 - NMR
*''Large + small subunit''
**[[1svt]], [[1pcq]] - EcGroEL + GroES<BR />
**[[1pf9]], [[1aon]], [[4pko]], [[5opx]] - EcGroEL + GroES + ADP<BR />
**[[3wvl]] - EcGroEL (mutant) + GroES + ATP<br />
**[[2c7c]], [[2c7d]] - EcGroEL + GroES – Cryo EM<BR />
**[[1gru]] - EcGroEL + GroES + ATP + ADP – Cryo EM<BR />
**[[3zpz]], [[3zq0]], [[3zq1]] - EcGroEL + GroES + ADP – Cryo EM<br />
**[[4v4o]], [[4pkn]] - TtCPN60 + CPN10 + ADP
*'''Group II'''
**[[3izh]], [[3izi]], [[3izj]], [[3izk]], [[3izl]], [[3izm]], [[3izn]], [[3los]], [[3iyf]], [[3j3x]] – MmCPN – ''Methanococcus maripaludis'' – EM<BR />
**[[3kfb]], [[3kfe]], [[3kfk]] – MmCPN<BR />
**[[5w79]] - MmCPN (mutant)<br />
**[[3j02]], [[3j03]] – MmCPN (mutant) – Cryo EM<br />
**[[3ruq]] - MmCPN + ADP<br />
**[[3rus]], [[5w74]] - MmCPN (mutant) + ADP<br />
**[[3ruw]] - MmCPN (mutant) + ADP-AlF3<br />
**[[3ruv]] - MmCPN (mutant) + ATP analog<br />
*'''CCT'''
**[[2xsm]], [[4b2t]] – bCPN CCT – bovine<BR />
**[[4v81]], [[4v94]], [[4v8r]] – CPN CCT - yeast<br />
**[[3iyg]], [[4a0o]] - bCPN CCT – Cryo EM<BR />
**[[4a0v]] - bCPN CCT + AMPPNP – Cryo EM<br />
**[[4a0w]] - bCPN CCT + ADP + AlF3 – Cryo EM<br />
**[[4a13]] - bCPN CCT + ADP – Cryo EM<br />
**[[3ktt]] - bCPN CCT β subunit – Cryo EM<BR />
**[[1gml]], [[1gn1]] - CPN CCT γ subunit apical domain – mouse
*'''Hsp33'''
See [[Heat Shock Proteins]]
*'''Thermosome'''
**[[1a6d]] - TaTherm α+β subunits – ''Thermoplasma acidophilum''<BR />
**[[1a6e]] - TaTherm α+β subunits + ADP<BR />
**[[1ass]], [[1asx]] - TaTherm α apical domain<BR />
**[[1e0r]] – TaTherm β apical domain<br />
**[[3ko1]] – AtTherm α subunit– ''Acidianus tengchongensis''<br />
**[[3j1b]], [[3j1c]], [[3j1e]] - AtTherm α subunit – Cryo EM <br />
**[[3j1f]] - AtTherm β subunit + ATP – Cryo EM <br />
**[[3aq1]] – Therm – ''Methanococcoides burtonii''<br />
**[[1q2v]], [[1q3r]] – TkTherm α subunit (mutant) – ''Thermococcus KS-1''<br />
**[[1q3q]] - TkTherm α subunit (mutant) + AMP-PNP<br />
**[[1q3s]] - TkTherm α subunit (mutant) + ADP<br />
**[[4xcd]] - SsTherm β subunit + ADP – ''Sulfolobus solfataricus''<br />
**[[4xcg]], [[4xci]] - SsTherm α+β subunits + ADP<br />
**[[1lep]] – CPN-10 – ''Mycobacterium leprae''
*'''Group III'''
*''Thermosome''
**[[5x9u]] - ChTherm α subunit + ADP – ''Carboxydothermus hydrogenoformans''<br />
**[[5x9v]] - ChTherm α subunit + ANP <br />
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 08:23, 6 May 2019

E. coli GroEL (green)/GroES (magenta) complex with ADP, AlF3, Mg+2 and K+ ions (PDB entry 1pcq)

Drag the structure with the mouse to rotate

References