6dao: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 6dao is ~~ON HOLD until Paper Publication~~

==NahE WT selenomethionine==

~~Authors~~: ~~Medellin~~, B.P., ~~LeVieux, J~~.A., ~~Zhang~~, Y.J., ~~Whitman~~, C.P.

== Structural highlights ==

<table><tr><td colspan='2'>[[6dao]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DAO OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DAO FirstGlance].

~~Description~~: ~~NahE WT selenomethionine~~

</td></tr><tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Trans-o-hydroxybenzylidenepyruvate_hydratase-aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.45 4.1.2.45] </td></tr>

[[Category: Whitman, C.P]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dao OCA], [http://pdbe.org/6dao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dao RCSB], [http://www.ebi.ac.uk/pdbsum/6dao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dao ProSAT]</td></tr>

[[Category: Zhang, Y.J]]

</table>

[[Category: ~~Levieux, J.A~~]]

== Function ==

[[Category: ~~Medellin, B.P~~]]

[[http://www.uniprot.org/uniprot/NAHE1_PSEPU NAHE1_PSEPU]] Involved in the naphthalene upper catabolic pathway. Catalyzes the transformation of trans-O-hydroxybenzylidenepyruvate (THBPA) to salicylaldehyde and pyruvate. The reaction is reversible. Can also use substrate which carry trans-alpha,beta-unsaturated keto acid side chain and adjacent hydroxyl group such as trans-4-(3-hydroxy-2-thianaphthenyl)-2-oxo-but-3-enoate, trans-4-(3-hydroxy-2-benzofuranyl)-2-oxobut-3-enoate, and trans-4-(3-hydroxy-2-thienyl)-2-oxobut-3-enoate.<ref>PMID:1447127</ref> <ref>PMID:8002605</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase]]

[[Category: LeVieux, J A]]

[[Category: Medellin, B P]]

[[Category: Whitman, C P]]

[[Category: Zhang, Y J]]

[[Category: Aldolase]]

[[Category: Lyase]]

[[Category: Nahe]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 6dao is ON HOLD  until Paper Publication
+==NahE WT selenomethionine==
+<StructureSection load='6dao' size='340' side='right'caption='[[6dao]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
-Authors: Medellin, B.P., LeVieux, J.A., Zhang, Y.J., Whitman, C.P.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6dao]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DAO FirstGlance]. <br>
-Description: NahE WT selenomethionine
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trans-o-hydroxybenzylidenepyruvate_hydratase-aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.45 4.1.2.45] </span></td></tr>
-[[Category: Whitman, C.P]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dao OCA], [http://pdbe.org/6dao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dao RCSB], [http://www.ebi.ac.uk/pdbsum/6dao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dao ProSAT]</span></td></tr>
-[[Category: Zhang, Y.J]]
+</table>
-[[Category: Levieux, J.A]]
+== Function ==
-[[Category: Medellin, B.P]]
+[[http://www.uniprot.org/uniprot/NAHE1_PSEPU NAHE1_PSEPU]] Involved in the naphthalene upper catabolic pathway. Catalyzes the transformation of trans-O-hydroxybenzylidenepyruvate (THBPA) to salicylaldehyde and pyruvate. The reaction is reversible. Can also use substrate which carry trans-alpha,beta-unsaturated keto acid side chain and adjacent hydroxyl group such as trans-4-(3-hydroxy-2-thianaphthenyl)-2-oxo-but-3-enoate, trans-4-(3-hydroxy-2-benzofuranyl)-2-oxobut-3-enoate, and trans-4-(3-hydroxy-2-thienyl)-2-oxobut-3-enoate.<ref>PMID:1447127</ref> <ref>PMID:8002605</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase]]
+[[Category: LeVieux, J A]]
+[[Category: Medellin, B P]]
+[[Category: Whitman, C P]]
+[[Category: Zhang, Y J]]
+[[Category: Aldolase]]
+[[Category: Lyase]]
+[[Category: Nahe]]