6il0: Difference between revisions
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==K3U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae== | |||
<StructureSection load='6il0' size='340' side='right'caption='[[6il0]], [[Resolution|resolution]] 1.93Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6il0]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IL0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IL0 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K3U:S-(2-oxo-2-phenylethyl)+(2R)-2-benzyl-4,4,4-trifluorobutanethioate'>K3U</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> | |||
[[Category: | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr> | ||
[[Category: Kang, L | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> | ||
[[Category: Lee, I | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6il0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6il0 OCA], [http://pdbe.org/6il0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6il0 RCSB], [http://www.ebi.ac.uk/pdbsum/6il0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6il0 ProSAT]</span></td></tr> | ||
</table> | |||
== Function == | |||
[[http://www.uniprot.org/uniprot/Q5H3Z2_XANOR Q5H3Z2_XANOR]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Peptide deformylase]] | |||
[[Category: Kang, L W]] | |||
[[Category: Lee, I H]] | |||
[[Category: Hydrolase]] | |||
Revision as of 06:46, 23 October 2019
K3U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
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