Sandbox Reserved 1098: Difference between revisions
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=== Secondary Structure === | === Secondary Structure === | ||
This protein is 37% <scene name='82/829351/Helix/1'>helical</scene> and 13% <scene name='82/829351/Sheet/1'>beta sheet</scene>. Indeed, it has 25 helices on 198 residues and 23 strands on 74 residues. It has also few 3/10 helices. [http://www.rcsb.org/pdb/explore/remediatedSequence.do?structureId=6HMM] | This protein is 37% <scene name='82/829351/Helix/1'>helical</scene> and 13% <scene name='82/829351/Sheet/1'>beta sheet</scene>, distributed like <scene name='82/829351/Helix_and_beta_sheet/1'>this</scene>. Indeed, it has 25 helices on 198 residues and 23 strands on 74 residues. It has also few 3/10 helices. [http://www.rcsb.org/pdb/explore/remediatedSequence.do?structureId=6HMM] | ||
Involving the torsion angles the backbone and the sidechain have to be differentiated. Indeed none residue in the <scene name='82/829351/Mainchain/1'>backbone</scene> does't respect the Ramachandran's angle, whereas in sidechains where 2% of the residues are Ramachandran outliers because they have non-rotameric sidechains. [http://files.rcsb.org/pub/pdb/validation_reports/hm/6hmm/6hmm_full_validation.pdf] | Involving the torsion angles the backbone and the sidechain have to be differentiated. Indeed none residue in the <scene name='82/829351/Mainchain/1'>backbone</scene> does't respect the Ramachandran's angle, whereas in sidechains where 2% of the residues are Ramachandran outliers because they have non-rotameric sidechains. [http://files.rcsb.org/pub/pdb/validation_reports/hm/6hmm/6hmm_full_validation.pdf] | ||
