Sandbox Reserved 1091: Difference between revisions
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'''The Subtilisin Domain:''' It contains 10 helices (alpha 1 to 10) and twelve chains (béta 1 to 10 and béta 13 to 14). The N-terminal domain of ASP seems to be like the catalytic domain of ''Kex2'', which is similar to those of subtilisin and other subtilisin-related proteases. This ASP catalytic site contains the catalytic Asp-78, His-115, and Ser-336 residues characteristic of subtilisins. In addition, 4 loops (L) protrude from the N-terminal subtilisin domain of ASP: Gly-3– Pro-26 (L1), Asn-221–Phe-241 (L2), Gly-300–Cys-326 (L3), and Gln-377–Glu-397 (L4). L1, L2, and L3 have random coil structure, whereas L4 forms a hairpin that protrudes toward the P-domain. Moreover, two disulfide bridges are formed between Cys-4 and Cys-24 in L1 and between Cys-301 and Cys-326 in L3, which stabilize those loops. | '''The Subtilisin Domain:''' It contains 10 helices (alpha 1 to 10) and twelve chains (béta 1 to 10 and béta 13 to 14). The N-terminal domain of ASP seems to be like the catalytic domain of ''Kex2'', which is similar to those of subtilisin and other subtilisin-related proteases. This ASP catalytic site contains the catalytic Asp-78, His-115, and Ser-336 residues characteristic of subtilisins. In addition, 4 loops (L) protrude from the N-terminal subtilisin domain of ASP: Gly-3– Pro-26 (L1), Asn-221–Phe-241 (L2), Gly-300–Cys-326 (L3), and Gln-377–Glu-397 (L4). L1, L2, and L3 have random coil structure, whereas L4 forms a hairpin that protrudes toward the P-domain. Moreover, two disulfide bridges are formed between Cys-4 and Cys-24 in L1 and between Cys-301 and Cys-326 in L3, which stabilize those loops. | ||
'''The P-domain:''' The core of the P-domain in ASP contains 8 béta-strands (béta 16 18 23 and 26). The extra occluding-region is comprised of two parts, pL1(Gly 521–Thr 525, béta 5, 6, and 12) and pL2 (Gly-557–Asn-578, béta 25), and it is situated close to the catalytic triad Asp-78,His-115,and Ser-336. | '''The P-domain:''' The core of the P-domain in ASP contains 8 béta-strands (béta 16 18 23 and 26). The extra occluding-region is comprised of two parts, pL1(Gly 521–Thr 525, béta 5, 6, and 12) and pL2 (Gly-557–Asn-578, béta 25), and it is situated close to <scene name='82/829344/Catalytic_triad/1'>the catalytic triad</scene> Asp-78,His-115,and Ser-336. | ||
https://www.degruyter.com/view/j/bchm.2017.398.issue-10/hsz-2016-0344/graphic/j_hsz-2016-0344_fig_001.jpg | https://www.degruyter.com/view/j/bchm.2017.398.issue-10/hsz-2016-0344/graphic/j_hsz-2016-0344_fig_001.jpg | ||
