TATA-Binding Protein: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
Michal Harel (talk | contribs)
32,850 edits
No edit summary
Michal Harel (talk | contribs)
32,850 edits
No edit summary
Line 25: Line 25:


{{Clear}}
{{Clear}}
== 3D Structures of TATA-binding protein ==
[[TATA-binding protein 3D structures]]


</StructureSection>
</StructureSection>
Line 35: Line 38:
* TBP  
* TBP  


**[[2z8u]] – TBP – ''Methanococcus janaschii''<br />
**[[1pcz]] – PwTBP - ''Pyrococcus woesei''<br />
**[[1vok]] – AtTBP - ''Arabidopsis thaliana''<br />
**[[1vok]] – AtTBP - ''Arabidopsis thaliana''<br />
**[[1tbp]] – yTBP - yeast<br />
**[[1tbp]] – yTBP - yeast<br />
**[[4b04]] – yTBP (mutant)<br />
**[[4b04]] – yTBP (mutant)<br />
**[[1mp9]] – TBP – ''Sulfolobus acidocaldarius''<br />
**[[1mp9]] – TBP – ''Sulfolobus acidocaldarius''<br />
**[[3eik]] – TBP – ''Encephalitozoon cuniculi''
**[[3eik]] – TBP – ''Encephalitozoon cuniculi''<br />
**[[2z8u]] – TBP – ''Methanococcus janaschii''<br />
**[[1pcz]] – PwTBP - ''Pyrococcus woesei''<br />


* TBP+DNA TATA box
* TBP+DNA TATA box


**[[1ytb]] - yTBP + DNA TATA<br />
**[[1cdw]] - hTBP core domain+ DNA TATA - human<br />
**[[1cdw]] - hTBP core domain+ DNA TATA - human<br />
**[[1tgh]] - hTBP + DNA TATA<br />
**[[1tgh]] - hTBP + DNA TATA<br />
**[[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]], [[1qn3]], [[1qn4]], [[1vto]] - AtTBP + DNA TATA <br />
**[[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]], [[1qn3]], [[1qn4]], [[1vto]] - AtTBP + DNA TATA <br />
**[[1ytb]] - yTBP + DNA TATA<br />


* TBP+DNA TATA box +TFIIA  
* TBP+DNA TATA box +TFIIA  


**[[1nvp]] - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA <br />
**[[1jfi]] - hTBP C-terminal+ TFIIA NC2+ DNA TATA<br />
**[[1rm1]] – yTBP+TFIIA α, β, γ chains+ DNA TATA <br />
**[[1rm1]] – yTBP+TFIIA α, β, γ chains+ DNA TATA <br />
**[[1ytf]] - yTBP+TFIIA + DNA TATA<br />
**[[1ytf]] - yTBP+TFIIA + DNA TATA<br />
**[[1nh2]] – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA<br />
**[[1nh2]] – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA<br />
**[[1nvp]] - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA <br />
**[[1jfi]] - hTBP C-terminal+ TFIIA NC2+ DNA TATA<br />


* TBP+DNA TATA box +TFIIB  
* TBP+DNA TATA box +TFIIB  


**[[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br />
**[[1c9b]] - hTBP C-terminal+TFIIBC+adenovirus major late promoter<br />
**[[1c9b]] - hTBP C-terminal+TFIIBC+adenovirus major late promoter<br />
**[[1vol]] – AtTBP+hTFIIB+DNA TATA<br />
**[[1vol]] – AtTBP+hTFIIB+DNA TATA<br />
**[[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br />
**[[1ais]], [[1d3u]] - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA <br />
**[[1ais]], [[1d3u]] - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA <br />
**[[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br />


* TBP+DNA TATA+TFIIIB
* TBP+DNA TATA+TFIIIB


**[[4roc]], [[4rod]], [[4roe]], [[5n9g]] - hTBP + TFIIIB + DNA TATA<br />
**[[1ngm]] - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA<br />
**[[1ngm]] - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA<br />
**[[4roc]], [[4rod]], [[4roe]], [[5n9g]] - hTBP + TFIIIB + DNA TATA<br />


* TBP+DNA TATA+TFIIA+TFIID
* TBP+DNA TATA+TFIIA+TFIID


**[[5fur]] - yTBP +TFIIB + TFIID + DNA TATA<br />
**[[6mzm]] - hTBP +TFIIA + TFIID + DNA TATA – Cryo EM<br />
**[[5fur]] - yTBP +TFIIA + TFIID + DNA TATA<br />
 
* TBP+TFIID
 
**[[6mzl]], [[6mzd]] - hTBP + TFIID – Cryo EM<br />


* TBP in RNA polymerase II complex
* TBP in RNA polymerase II complex


**[[5fyw]], [[5fz5]], [[5fmf]], [[4v1n]], [[4v1o]], [[5sva]], [[5oqj]], [[5oqm]] – yTBP + DNA-directed RNA polymerase II + TFII + DNA - Cryo EM<br />
**[[5iy6]], [[5iy7]], [[5iy8]], [[5iy9]], [[5iya]], [[5iyb]], [[5iyc]], [[5iyd]] – hTBP + DNA-directed RNA polymerase II + TFII + DNA - Cryo EM<br />
**[[5iy6]], [[5iy7]], [[5iy8]], [[5iy9]], [[5iya]], [[5iyb]], [[5iyc]], [[5iyd]] – hTBP + DNA-directed RNA polymerase II + TFII + DNA - Cryo EM<br />
**[[5fyw]], [[5fz5]], [[5fmf]], [[4v1n]], [[4v1o]] – yTBP + DNA-directed RNA polymerase II + TFII + DNA<br />
**[[6o9l]], [[6gym]], [[6gyl]], [[6gyk]], [[6f44]], [[6f42]], [[6f41]], [[6f40]], [[6eu0]], [[6cnf]], [[6cnd]], [[6cnc]], [[6cnb]] – yTBP + DNA-directed RNA polymerase II + TFII + DNA – Cryo EM<br />
* TBP in SAGA transcriptional complex


**[[6tbm]], [[6tb4]] – yTBP + SAGA – cryo EM<br />
}}
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]
Retrieved from "https://proteopedia.org/TATA-Binding_Protein"