5zb6

NMR structure of UVI31+

spinqualitylabelsall models 5zb6, 10 NMR models Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 5zb6 is a 1 chain structure. This structure supersedes the now removed PDB entry 2ma0. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance. Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Publication Abstract from PubMed Chlamydomonas reinhardtii is a single celled alga that undergoes apoptosis in response to UV-C irradiation. UVI31+, a novel UV-inducible DNA endonuclease in C. reinhardtii, which normally localizes near cell wall and pyrenoid regions, gets redistributed into punctate foci within the whole chloroplast, away from the pyrenoid, upon UV-stress. Solution NMR structure of the first putative UV inducible endonuclease UVI31+ revealed an alpha1-beta1-beta2-alpha2-alpha3-beta3 fold similar to BolA and type II KH-domain ubiquitous protein families. Three alpha-helices of UVI31+ constitute one side of the protein surface, which are packed to the other side, made of three-stranded beta-sheet, with intervening hydrophobic residues. A twenty-three residues long polypeptide stretch (D54-H76) connecting beta1 and beta2 strands is found to be highly flexible. Interestingly, UVI31+ recognizes the DNA primarily through its beta-sheet. We propose that the catalytic triad residues involving Ser114, His95 and Thr116 facilitate DNA endonuclease activity of UVI31+. Further, decreased endonuclease activity of the S114A mutant is consistent with the direct participation of Ser114 in the catalysis. This study provides the first structural description of a plant chloroplast endonuclease that is regulated by UV-stress response. Structural characterization of a novel KH-domain containing plant chloroplast endonuclease.,Rout AK, Singh H, Patel S, Raghvan V, Gautam S, Minda R, Rao BJ, Chary KVR Sci Rep. 2018 Sep 13;8(1):13750. doi: 10.1038/s41598-018-31142-w. PMID:30214061 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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