5z7d: Difference between revisions

Revision as of 08:29, 4 November 2020

p204HINab-dsDNA complex structure

Structural highlights

5z7d is a 7 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:	5yzp, 5yzw
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[IFI4_MOUSE] Inhibits the transcription of ribosomal RNA. May inhibit DNA binding by UBTF. Inhibits cell growth via p53/TP53 and RB1-dependent and independent pathways. Acts as a coactivator of RUNX2 during osteogenesis. May be involved in macrophage differentiation. Enables skeletal muscle and cardiac myocyte differentiation by sequestring Id proteins in the cytosol and promoting their ubiquitination and subsequent degradation.^[1] ^[2] ^[3] ^[4] ^[5] ^[6] ^[7]

References

↑ Liu CJ, Wang H, Lengyel P. The interferon-inducible nucleolar p204 protein binds the ribosomal RNA-specific UBF1 transcription factor and inhibits ribosomal RNA transcription. EMBO J. 1999 May 17;18(10):2845-54. PMID:10329630 doi:https://dx.doi.org/10.1093/emboj/18.10.2845
↑ Liu CJ, Ding B, Wang H, Lengyel P. The MyoD-inducible p204 protein overcomes the inhibition of myoblast differentiation by Id proteins. Mol Cell Biol. 2002 May;22(9):2893-905. PMID:11940648
↑ Liu CJ, Chang E, Yu J, Carlson CS, Prazak L, Yu XP, Ding B, Lengyel P, Di Cesare PE. The interferon-inducible p204 protein acts as a transcriptional coactivator of Cbfa1 and enhances osteoblast differentiation. J Biol Chem. 2005 Jan 28;280(4):2788-96. doi: 10.1074/jbc.M412604200. Epub 2004, Nov 19. PMID:15557274 doi:https://dx.doi.org/10.1074/jbc.M412604200
↑ Dauffy J, Mouchiroud G, Bourette RP. The interferon-inducible gene, Ifi204, is transcriptionally activated in response to M-CSF, and its expression favors macrophage differentiation in myeloid progenitor cells. J Leukoc Biol. 2006 Jan;79(1):173-83. Epub 2005 Oct 21. PMID:16244109 doi:https://dx.doi.org/jlb.0205083
↑ Asefa B, Dermott JM, Kaldis P, Stefanisko K, Garfinkel DJ, Keller JR. p205, a potential tumor suppressor, inhibits cell proliferation via multiple pathways of cell cycle regulation. FEBS Lett. 2006 Feb 20;580(5):1205-14. Epub 2006 Jan 20. PMID:16458891 doi:https://dx.doi.org/10.1016/j.febslet.2006.01.032
↑ Ding B, Liu CJ, Huang Y, Hickey RP, Yu J, Kong W, Lengyel P. p204 is required for the differentiation of P19 murine embryonal carcinoma cells to beating cardiac myocytes: its expression is activated by the cardiac Gata4, Nkx2.5, and Tbx5 proteins. J Biol Chem. 2006 May 26;281(21):14882-92. doi: 10.1074/jbc.M511747200. Epub 2006, Mar 22. PMID:16556595 doi:https://dx.doi.org/10.1074/jbc.M511747200
↑ Ding B, Liu CJ, Huang Y, Yu J, Kong W, Lengyel P. p204 protein overcomes the inhibition of the differentiation of P19 murine embryonal carcinoma cells to beating cardiac myocytes by Id proteins. J Biol Chem. 2006 May 26;281(21):14893-906. doi: 10.1074/jbc.M511748200. Epub, 2006 Mar 22. PMID:16556596 doi:https://dx.doi.org/10.1074/jbc.M511748200

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OCA

[1] Liu CJ, Wang H, Lengyel P. The interferon-inducible nucleolar p204 protein binds the ribosomal RNA-specific UBF1 transcription factor and inhibits ribosomal RNA transcription. EMBO J. 1999 May 17;18(10):2845-54. PMID:10329630 doi:https://dx.doi.org/10.1093/emboj/18.10.2845

[2] Liu CJ, Ding B, Wang H, Lengyel P. The MyoD-inducible p204 protein overcomes the inhibition of myoblast differentiation by Id proteins. Mol Cell Biol. 2002 May;22(9):2893-905. PMID:11940648

[3] Liu CJ, Chang E, Yu J, Carlson CS, Prazak L, Yu XP, Ding B, Lengyel P, Di Cesare PE. The interferon-inducible p204 protein acts as a transcriptional coactivator of Cbfa1 and enhances osteoblast differentiation. J Biol Chem. 2005 Jan 28;280(4):2788-96. doi: 10.1074/jbc.M412604200. Epub 2004, Nov 19. PMID:15557274 doi:https://dx.doi.org/10.1074/jbc.M412604200

[4] Dauffy J, Mouchiroud G, Bourette RP. The interferon-inducible gene, Ifi204, is transcriptionally activated in response to M-CSF, and its expression favors macrophage differentiation in myeloid progenitor cells. J Leukoc Biol. 2006 Jan;79(1):173-83. Epub 2005 Oct 21. PMID:16244109 doi:https://dx.doi.org/jlb.0205083

[5] Asefa B, Dermott JM, Kaldis P, Stefanisko K, Garfinkel DJ, Keller JR. p205, a potential tumor suppressor, inhibits cell proliferation via multiple pathways of cell cycle regulation. FEBS Lett. 2006 Feb 20;580(5):1205-14. Epub 2006 Jan 20. PMID:16458891 doi:https://dx.doi.org/10.1016/j.febslet.2006.01.032

[6] Ding B, Liu CJ, Huang Y, Hickey RP, Yu J, Kong W, Lengyel P. p204 is required for the differentiation of P19 murine embryonal carcinoma cells to beating cardiac myocytes: its expression is activated by the cardiac Gata4, Nkx2.5, and Tbx5 proteins. J Biol Chem. 2006 May 26;281(21):14882-92. doi: 10.1074/jbc.M511747200. Epub 2006, Mar 22. PMID:16556595 doi:https://dx.doi.org/10.1074/jbc.M511747200

[7] Ding B, Liu CJ, Huang Y, Yu J, Kong W, Lengyel P. p204 protein overcomes the inhibition of the differentiation of P19 murine embryonal carcinoma cells to beating cardiac myocytes by Id proteins. J Biol Chem. 2006 May 26;281(21):14893-906. doi: 10.1074/jbc.M511748200. Epub, 2006 Mar 22. PMID:16556596 doi:https://dx.doi.org/10.1074/jbc.M511748200

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@@ Line 1: / Line 1: @@
 ==p204HINab-dsDNA complex structure==
-<StructureSection load='5z7d' size='340' side='right' caption='[[5z7d]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
+<StructureSection load='5z7d' size='340' side='right'caption='[[5z7d]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5z7d]] is a 7 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z7D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Z7D FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5z7d]] is a 7 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z7D OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Z7D FirstGlance]. <br>
 </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5yzp|5yzp]], [[5yzw|5yzw]]</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5z7d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z7d OCA], [http://pdbe.org/5z7d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z7d RCSB], [http://www.ebi.ac.uk/pdbsum/5z7d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z7d ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5z7d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z7d OCA], [http://pdbe.org/5z7d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z7d RCSB], [http://www.ebi.ac.uk/pdbsum/5z7d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z7d ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 13: / Line 13: @@
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Jiang, J]]
 [[Category: Jin, T]]

5z7d: Difference between revisions

Revision as of 08:29, 4 November 2020

p204HINab-dsDNA complex structure

Structural highlights

Function

References

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