Cavity programs: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) |
Eric Martz (talk | contribs) |
||
| Line 117: | Line 117: | ||
==PACUPP== | ==PACUPP== | ||
<table align="right" width="660" cellpadding="5" hspace="8" style="border: 1px solid black; border-collapse:collapse;padding-left:8px;"><tr><td> | |||
<span style="font-size:120%; font-weight:bold;">PACUPP:</span><br>Membrane-proximal cavity in the [[SARS-CoV-2 spike protein priming by furin|SARS-CoV-2 spike protein]] ([[6zgi]]) rendered as pseudoatoms colored by depth from the surface, showing <font color="red">three fenestrations</font>. | |||
*Left: cavity definition = coarse (pseudoatom radius 2.5 Å). | |||
*Right: cavity definition = fine (pseudoatom radius 1.5 Å). | |||
</td><td> | |||
[[Image:Pacupp-6zgi-coarse.png|200px]] | |||
</td><td> | |||
[[Image:Pacupp-6zgi-fine.png|200px]] | |||
</td></tr></table> | |||
<br> | |||
<table align="right" width="660" cellpadding="5" hspace="8" style="border: 1px solid black; border-collapse:collapse;padding-left:8px;"><tr><td> | <table align="right" width="660" cellpadding="5" hspace="8" style="border: 1px solid black; border-collapse:collapse;padding-left:8px;"><tr><td> | ||
<span style="font-size:120%; font-weight:bold;">PACUPP:</span><br>Membrane-proximal cavity in the [[SARS-CoV-2 spike protein priming by furin|SARS-CoV-2 spike protein]] ([[6zgi]]) rendered as pseudoatoms colored by depth from the surface, showing <font color="red">three fenestrations</font>. | <span style="font-size:120%; font-weight:bold;">PACUPP:</span><br>Membrane-proximal cavity in the [[SARS-CoV-2 spike protein priming by furin|SARS-CoV-2 spike protein]] ([[6zgi]]) rendered as pseudoatoms colored by depth from the surface, showing <font color="red">three fenestrations</font>. | ||