AlphaFold2 examples from CASP 14: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, Bureaucrats, journal, Administrators
30,125 edits
No edit summary
Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, Bureaucrats, journal, Administrators
30,125 edits
No edit summary
Line 24: Line 24:
! Model || GDT_TS || C&alpha; RMSD, Å || C&alpha; Aligned || RMSD Including<br>Sidechains, Å || Atoms Aligned
! Model || GDT_TS || C&alpha; RMSD, Å || C&alpha; Aligned || RMSD Including<br>Sidechains, Å || Atoms Aligned
|-
|-
| [[7jtl]]:A ||  ||  4.02<br>'''0.66''' || 102/102 (100%)<br>'''87/102 (85%)''' || 4.3<br>'''1.58''' || 829/918 (90%)<br>'''709/918 (77%)'''
| [[7jtl]]:A ||  ||  4.02<br>'''0.66''' || 102/102 (100%)<br>'''87/102 (85%)''' || 4.3<br>'''1.58''' || 829/829 (100%)<br>'''709/829 (86%)'''
|-
|-
| AlphaFold2 || 87 || 2.58<br>'''1.25''' || 92/92 (100%)<br>'''83/92* (90%)''' || 3.23<br>'''1.91''' || 727/728 (100%)<br>'''679/728 (93%)'''
| AlphaFold2 || 87 || 2.58<br>'''1.25''' || 92/92 (100%)<br>'''83/92* (90%)''' || 3.23<br>'''1.91''' || 747/748 (100%)<br>'''679/748 (91%)'''
|-
| 2nd Best* || 43 || 5.33<br>'''1.71''' || 92/92 (100%)<br>'''38/92 (41%)''' || 6.54<br>'''5.86''' || 747/??? (%)<br>
|-
| 3rd Best§ || 33 || C&alpha; RMSD, Å || C&alpha; Aligned || RMSD Including<br>Sidechains, Å || Atoms Aligned
|}
|}
Alignments by "Magic Fit" of Swiss-PdbViewer 4.1.<br>
Alignments by "Magic Fit" of Swiss-PdbViewer 4.1.<br>
'''Alignments by "Iterative Magic Fit" of Swiss-PdbViewer 4.1.'''
'''Alignments by "Iterative Magic Fit" of Swiss-PdbViewer 4.1.'''
*Second best: Group of Xian Ming Pan.
§Third best: Group of Perez Lab.


</StructureSection>
</StructureSection>
Retrieved from "https://proteopedia.org/AlphaFold2_examples_from_CASP_14"