AlphaFold2 examples from CASP 14: Difference between revisions

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Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, Bureaucrats, journal, Administrators
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===Third Best Prediction for ORF8===
===Third Best Prediction for ORF8===


The third best prediction was by the Perez Lab, with GDT_TS 33 (see TABLE above). It correctly predicted the anti-parallel beta sheet formed by the amino and carboxy terminal ends of the chain. <scene name='87/875686/3rd_best_orf8/1'>When the 2-stranded parallel beta strands formed by the ends of the chains are aligned, the remainder aligns poorly</scene>. This prediction '''failed to include any of the three disulfide bonds''' found in the [[empirical models]], or in the best and 2nd best predictions (not shown).
The third best prediction was by the Perez Lab, with GDT_TS 33 (see TABLE above). It '''correctly predicted the parallel beta strands formed by the amino and carboxy terminal ends of the chain'''. <scene name='87/875686/3rd_best_orf8/1'>When the 2-stranded parallel beta strands formed by the ends of the chains are aligned, the remainder aligns poorly</scene>. This prediction has '''no disulfide bonds'''.


===Baker Rosetta Server Prediction for ORF8===
===Baker Rosetta Server Prediction for ORF8===
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