AlphaFold2 examples from CASP 14: Difference between revisions
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| 3rd Best§ || 33 || 0 || 13.37<br>† || 92/92 (100%)<br>† || 14.50<br>† || 747/748 (100%)<br>† | | 3rd Best§ || 33 || 0 || 13.37<br>† || 92/92 (100%)<br>† || 14.50<br>† || 747/748 (100%)<br>† | ||
|- | |- | ||
| Rosetta<br>Server || 26 || | | Zhang-TBM<br>Server || 27 || || || || || | ||
|- | |||
| Rosetta<br>Server || 26 || (2‡) || 14.99<br>† || 92/92 (100%)<br>† || || | |||
|} | |} | ||
:Alignments by "Magic Fit" of Swiss-PdbViewer 4.1.<br> | :Alignments by "Magic Fit" of Swiss-PdbViewer 4.1.<br> | ||
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:*Second best: Group of Xian Ming Pan.<br> | :*Second best: Group of Xian Ming Pan.<br> | ||
:§Third best: Group of Perez Lab.<br> | :§Third best: Group of Perez Lab.<br> | ||
:† Iterative Magic Fit was unable to align. | :† Iterative Magic Fit was unable to align.<br> | ||
:‡ Neither disulfide bond is correct. | |||
===Second Best Prediction for ORF8=== | ===Second Best Prediction for ORF8=== | ||
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===Top Prediction by an Automated Server=== | ===Top Prediction by an Automated Server=== | ||
Among predictions by automated servers for all ~100 CASP 14 targets, the top ranking server was QUARK from the Yang Zhang group (Univ. Michigan). For ORF8, the Zhang-TBM server made the best server prediction with a '''GDT_TS of 27'''. (The prediction by QUARK was | Among predictions by automated servers for all ~100 CASP 14 targets, the top ranking server was QUARK from the Yang Zhang group (Univ. Michigan). For ORF8, the Zhang-TBM server made the best server prediction with a '''GDT_TS of 27'''. (The prediction by QUARK was almost as good, GDT_TS 26.) | ||
===Baker Rosetta Server Prediction for ORF8=== | ===Baker Rosetta Server Prediction for ORF8=== | ||
