AlphaFold2 examples from CASP 14: Difference between revisions
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==GDT_TS Calculations== | ==GDT_TS Calculations== | ||
GDT_TS values for predictions are taken from CASP 14 results. GDT_TS values for 7JTL and 5A2F vs. 7JX6 chain A were calculated using the [http://linum.proteinmodel.org/ AS2TS server] of Adam Zemla<ref name="zemla">PMID: 12824330</ref>. See instructions for [[Calculating GDT_TS]]. CASP 14 reported GDT_TS 86.96 for the AlphaFold2 prediction, while the AS2TS server calculated GDT_TS 86.41. | GDT_TS values for predictions are taken from CASP 14 results. GDT_TS values for 7JTL and 5A2F vs. 7JX6 chain A were calculated using the [http://linum.proteinmodel.org/ AS2TS server] of Adam Zemla<ref name="zemla">PMID: 12824330</ref>. See instructions for [[Calculating GDT_TS]]. CASP 14 reported GDT_TS 86.96 for the AlphaFold2 prediction, while the AS2TS server calculated GDT_TS 89.56 (vs. 7JTL chain A, likely used by CASP 14), and GDT_TS 86.41 vs 7jx6 chain A. | ||
==References== | ==References== | ||
<references /> | <references /> | ||
