AlphaFold2 examples from CASP 14: Difference between revisions
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The crystallographic structure, not available to the prediction teams during the CASP competition, is [[6vr4]], with [[resolution]] 3.5 Å, and an Rfree "reliability" of "much better than average for this resolution" (according to [[FirstGlance in Jmol]]). The termini of the chain are far apart from each other (~85 Å), and there are no disulfide bonds. | The crystallographic structure, not available to the prediction teams during the CASP competition, is [[6vr4]], with [[resolution]] 3.5 Å, and an Rfree "reliability" of "much better than average for this resolution" (according to [[FirstGlance in Jmol]]). The termini of the chain are far apart from each other (~85 Å), and there are no disulfide bonds. | ||
The CASP 14 target sequence of 404 residues begins at sequence number 337 and ends at 901, a span of 565 residues. The target sequence is 404 residues because it excludes residues 370-530 (length 161), which form a different domain. <scene name='87/875686/6vr4_b_2180_residues/ | The CASP 14 target sequence of 404 residues begins at sequence number 337 and ends at 901, a span of 565 residues. The target sequence is 404 residues because it excludes residues 370-530 (length 161), which form a different domain. <scene name='87/875686/6vr4_b_2180_residues/3'>Here is the full 2,180 residue chain with 337-901 (565 residues) opaque</scene>. | ||
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