Human lactoferrin: Difference between revisions

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Karsten Theis (talk | contribs)
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Karsten Theis (talk | contribs)
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The structure of LF<sub>N</sub> undergoes a dramatic conformational change upon iron binding. Upon iron binding, the two domains of LF<sub>N</sub> undergo a rigid 54.1º rotation about a <scene name='Sandbox_Reserved_302/Hinge/1'>screw axis</scene> that passes through Thr90 and Pro251.<ref name="gerstein">PMID:8230220</ref>
The structure of LF<sub>N</sub> undergoes a dramatic conformational change upon iron binding. Upon iron binding, the two domains of LF<sub>N</sub> undergo a rigid 54.1º rotation about a <scene name='Sandbox_Reserved_302/Hinge/1'>screw axis</scene> that passes through Thr90 and Pro251.<ref name="gerstein">PMID:8230220</ref>


<jmol>
To visualize the <jmol>
   <jmolLink>
   <jmolLink>
     <script>load files "=1CB6" "=1LCF";model 0;cartoon only;domain2 = {(92-249 or 1092-1249)};
     <script>load files "=1CB6" "=1LCF";model 0;cartoon only;domain2 = {(92-249 or 1092-1249)};select domain2;color red;
structures = [{1.1}, {2.1}];
structures = [{1.1}, {2.1}];
domains = [[{not domain2},{not domain2}, {alpha and not domain2 and not altloc="B"}], [{domain2}, {(91,1091,250,1250) and *.CA}, {alpha and domain2 and not altloc="B"}],];
domains = [[{not domain2},{not domain2}, {alpha and not domain2 and not altloc="B"}], [{domain2}, {(91,1091,250,1250) and *.CA}, {alpha and domain2 and not altloc="B"}],];
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     <text>domain motion</text>
     <text>domain motion</text>
   </jmolLink>
   </jmolLink>
</jmol>
</jmol>, we first load the two structures and superimpose them. You can choose a viewing orientation before pressing the morph button, which will visualize the conformational change from structure 1CB6 to 1LCF and back again.


<jmol>
<jmol>

Revision as of 01:48, 10 August 2021

Human lactoferrin complex with Fe and carbonate, 1dsn

Drag the structure with the mouse to rotate

References

Page originally authored by Christian Axen

Proteopedia Page Contributors and Editors (what is this?)

Andrea Gorrell, Karsten Theis, Michal Harel, Alexander Berchansky