AlphaFold: Difference between revisions
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DeepMind has provided an [https://colab.research.google.com/github/deepmind/alphafold/blob/main/notebooks/AlphaFold.ipynb Alphafold Colab] that uses a "slightly simplified" version of AlphaFold version 2.0: "While accuracy will be near-identical to the full AlphaFold system on many targets, a small fraction have a large drop in accuracy due to the smaller MSA and lack of templates.". The AlphaFold Colab is '''free to use'''. The code is executed in a virtual machine private to your account, and data are stored on Google Drive. Nothing is installed on your computer; "everything happens in the cloud on Google Colab"<ref name="alphafoldcolab">[https://colab.research.google.com/github/deepmind/alphafold/blob/main/notebooks/AlphaFold.ipynb Alphafold Colab].</ref> | DeepMind has provided an [https://colab.research.google.com/github/deepmind/alphafold/blob/main/notebooks/AlphaFold.ipynb Alphafold Colab] that uses a "slightly simplified" version of AlphaFold version 2.0: "While accuracy will be near-identical to the full AlphaFold system on many targets, a small fraction have a large drop in accuracy due to the smaller MSA and lack of templates.". The AlphaFold Colab is '''free to use'''. The code is executed in a virtual machine private to your account, and data are stored on Google Drive. Nothing is installed on your computer; "everything happens in the cloud on Google Colab"<ref name="alphafoldcolab">[https://colab.research.google.com/github/deepmind/alphafold/blob/main/notebooks/AlphaFold.ipynb Alphafold Colab].</ref> | ||
For those unfamiliar with Colabs, the user interface may look unfamilar, but the instructions are clear and straightforward to use. The mentions of "Runtime -> Run after" refer to the Runtime pull-down menu at the very top of the page. Getting a result may take several hours. | |||
==References== | ==References== | ||
