How to predict structures with AlphaFold: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) |
Eric Martz (talk | contribs) |
||
| Line 31: | Line 31: | ||
Static images of backbone renderings of predicted models will appear at the bottom of the section ''run alphafold'' as they are completed. | Static images of backbone renderings of predicted models will appear at the bottom of the section ''run alphafold'' as they are completed. | ||
===Estimated Reliability=== | |||
Each predicted model has an average estimated reliability (pLDDT). >90 is likely accurate; <70 is low confidence. For more about interpreting these values, please see the [https://alphafold.ebi.ac.uk/faq AlphaFold Database FAQ]. | Each predicted model has an average estimated reliability (pLDDT). >90 is likely accurate; <70 is low confidence. For more about interpreting these values, please see the [https://alphafold.ebi.ac.uk/faq AlphaFold Database FAQ]. | ||
Each residue has an estimated reliability of its position (0-100) in the PDB temperature | |||
[[FirstGlance in Jmol]] version 3.7 (when released) will automatically color uploaded AlphaFold models by estimated reliability per residue. | [[FirstGlance in Jmol]] version 3.7 (when released) will automatically color uploaded AlphaFold models by estimated reliability per residue. | ||