Sandbox Reserved 1650: Difference between revisions

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== Composition and 3D structure <ref>DOI 32025030</ref> ==
== Composition and 3D structure <ref>DOI 32025030</ref> ==
=== Global structure ===  
=== Global structure ===  
'''Human thyroglobulin''' is a dimeric glycoprotein (see a <scene name='86/868183/Monomer_tg/1'>monomer</scene>)consisting of '''2749 amino acid residues''' with a molecular weight of '''660 kDa'''. The average size of the dimer is '''120x235 Å'''.  
'''Human thyroglobulin''' is a dimeric glycoprotein (see a <scene name='86/868183/Monomer_tg/1'>monomer</scene>)consisting of 2 times '''2749 amino acid residues''' with a molecular weight of '''660 kDa'''. The average size of the dimer is '''120x235 Å'''.  
   
   
Each of its monomers comprises '''5 distinct regions''' on which approximately 66 <scene name='86/868183/Tyr/1'>tyrosines</scene> (chain A in blue, chain B in green, chain C in dark red, chain D in light red) are distributed. These are the regions :  
Each of its monomers comprises '''5 distinct regions''' on which approximately 66 <scene name='86/868183/Tyr/1'>tyrosines</scene> (chain A in blue, chain B in green, chain C in dark red, chain D in light red) are distributed. These are the regions :  
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There are 4 hormonogenic sites for <scene name='86/868183/Tg/3'>TG</scene> :
There are 4 hormonogenic sites for <scene name='86/868183/Tg/3'>TG</scene> :


- an <scene name='86/868183/Site_a/2'>A site</scene>, comprising two fixed donor tyrosines Y234 and Y149 and one flexible acceptor tyrosine: Y24 [[https://www.youtube.com/watch?v=98MKFRc6S_w&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=4>Site A]]
- an <scene name='86/868183/Site_a/2'>A site</scene>, comprising two fixed donor tyrosines Y234 and Y149 and one flexible acceptor tyrosine: Y24 [[https://www.youtube.com/watch?v=98MKFRc6S_w&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=4>Site A]].


- a <scene name='86/868183/Site_b/3'>B sites</scene>, including one Y2573 donor and one Y2540 acceptor [[https://www.youtube.com/watch?v=aNd32NLk9Fk&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=3>Site B]]
- a <scene name='86/868183/Site_b/4'>B site</scene>, including one Y2573 donor and one Y2540 acceptor [[https://www.youtube.com/watch?v=aNd32NLk9Fk&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=3>Site B]].


- a C site, comprising both donor and acceptor tyrosine Y2766
- a '''C site''', comprising both donor and acceptor tyrosine Y2766 (not resolved in the map).


- a <scene name='86/868183/Sites_d/1'>D sites</scene>, comprising a Y108 donor and a Y1310 acceptor [[https://www.youtube.com/watch?v=JYUPk59lVVw&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=2>Site D]]
- a <scene name='86/868183/Site_d/1'>D site</scene>, comprising a Y108 donor and a Y1310 acceptor [[https://www.youtube.com/watch?v=JYUPk59lVVw&list=PLMGnv0h7EIJydYifu7JSxrkXMzpwlkyDF&index=2>Site D]].
   
   
An acidic Asp (aspartic acid) or Glu (glutamic acid) residue always precedes the acceptor and a lysine is always close to the donor.   
An acidic Asp (aspartic acid) or Glu (glutamic acid) residue always precedes the acceptor and a lysine is always close to the donor.   

Revision as of 21:50, 11 January 2022

This Sandbox is Reserved from 26/11/2020, through 26/11/2021 for use in the course "Structural Biology" taught by Bruno Kieffer at the University of Strasbourg, ESBS. This reservation includes Sandbox Reserved 1643 through Sandbox Reserved 1664.
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Human thyroglobulin (TG)

Human thyroglobulin

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References