3dky: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:


==Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), tetragonal form, to 3.6 Ang resolution==
==Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), tetragonal form, to 3.6 Ang resolution==
<StructureSection load='3dky' size='340' side='right' caption='[[3dky]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
<StructureSection load='3dky' size='340' side='right'caption='[[3dky]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3dky]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"streptoccocus_de_la_mammite"_nocard_and_mollereau_1887 "streptoccocus de la mammite" nocard and mollereau 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DKY FirstGlance]. <br>
<table><tr><td colspan='2'>[[3dky]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/"streptoccocus_de_la_mammite"_nocard_and_mollereau_1887 "streptoccocus de la mammite" nocard and mollereau 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DKY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dkx|3dkx]], [[1l2m|1l2m]], [[2hw0|2hw0]], [[1ksx|1ksx]], [[1ksy|1ksy]], [[2gxa|2gxa]], [[1rz9|1rz9]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dkx|3dkx]], [[1l2m|1l2m]], [[2hw0|2hw0]], [[1ksx|1ksx]], [[1ksy|1ksy]], [[2gxa|2gxa]], [[1rz9|1rz9]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">repB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1311 "Streptoccocus de la mammite" Nocard and Mollereau 1887])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">repB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1311 "Streptoccocus de la mammite" Nocard and Mollereau 1887])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dky OCA], [http://pdbe.org/3dky PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dky RCSB], [http://www.ebi.ac.uk/pdbsum/3dky PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dky ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dky OCA], [https://pdbe.org/3dky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dky RCSB], [https://www.ebi.ac.uk/pdbsum/3dky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dky ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/REPB_STRAG REPB_STRAG]] Is essential for plasmid replication. Nicks the positive strand at the plus origin of replication.  
[[https://www.uniprot.org/uniprot/REPB_STRAG REPB_STRAG]] Is essential for plasmid replication. Nicks the positive strand at the plus origin of replication.  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 35:
</StructureSection>
</StructureSection>
[[Category: Streptoccocus de la mammite nocard and mollereau 1887]]
[[Category: Streptoccocus de la mammite nocard and mollereau 1887]]
[[Category: Large Structures]]
[[Category: Blanco, A G]]
[[Category: Blanco, A G]]
[[Category: Boer, D R]]
[[Category: Boer, D R]]