3dxn: Difference between revisions
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==Crystal structure of the calcium-dependent kinase from toxoplasma gondii, 541.m00134, kinase domain.== | ==Crystal structure of the calcium-dependent kinase from toxoplasma gondii, 541.m00134, kinase domain.== | ||
<StructureSection load='3dxn' size='340' side='right' caption='[[3dxn]], [[Resolution|resolution]] 2.17Å' scene=''> | <StructureSection load='3dxn' size='340' side='right'caption='[[3dxn]], [[Resolution|resolution]] 2.17Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3dxn]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3dxn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxgo Toxgo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXN FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">541.m00134 ([ | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">541.m00134 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5811 TOXGO])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxn OCA], [https://pdbe.org/3dxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxn RCSB], [https://www.ebi.ac.uk/pdbsum/3dxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxn ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxn_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxn_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 17: | Line 17: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxn ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxn ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | |||
*[[Calcium-dependent protein kinase|Calcium-dependent protein kinase]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Toxgo]] | [[Category: Toxgo]] | ||
[[Category: Ali, A]] | [[Category: Ali, A]] | ||
Revision as of 08:10, 9 February 2022
Crystal structure of the calcium-dependent kinase from toxoplasma gondii, 541.m00134, kinase domain.
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Large Structures
- Toxgo
- Ali, A
- Amani, M
- Arrowsmith, C H
- Artz, J D
- Bochkarev, A
- Bountra, C
- Cossar, D
- Edwards, A M
- Hassani, A
- Hui, R
- Kozieradzki, I
- Lew, J
- Lin, Y H
- Structural genomic
- Schapira, M
- Wasney, G
- Wernimont, A K
- Wikstrom, M
- Atp-binding
- Calcium dependent kinase
- Calmodulin
- Cdpk
- Kinase
- Nucleotide-binding
- Parasite
- Sgc
- Transferase
