Ribosome 3D structures: Difference between revisions
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**[[5x8r]] – s30S ribosomal subunit – spinach - Cryo-EM<br /> | **[[5x8r]] – s30S ribosomal subunit – spinach - Cryo-EM<br /> | ||
**[[2zm6]], [[1n36]], [[1j5e]], [[3oto]], [[5wnq]], [[5wnr]], [[5wns]], [[5wnt]], [[5wnu]], [[5wnv]] - Tt30S ribosomal subunit+THX+16S rRNA – | **[[2zm6]], [[1n36]], [[1j5e]], [[3oto]], [[5wnq]], [[5wnr]], [[5wns]], [[5wnt]], [[5wnu]], [[5wnv]] - Tt30S ribosomal subunit+THX+16S rRNA – Thermus thermophiles<br /> | ||
**[[2vqe]], [[2vqf]], [[2uuc]], | **[[2vqe]], [[2vqf]], [[2uuc]], 2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[6cao]], [[6caq]], [[6cas]] - Tt30S ribosomal subunit+16S rRNA+RNA fragment<br /> | ||
**[[ | **[[3i1m]], [[3i1o]], [[1i94]], [[1fka]], [[4dr1]] - Tt30S ribosomal subunit+16S rRNA<br /> | ||
[[1i94]], [[1fka]], [[4dr1]] - Tt30S ribosomal subunit+16S rRNA<br /> | |||
**[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S rRNA (mutant)<br /> | **[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S rRNA (mutant)<br /> | ||
**[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] - Tt30S ribosomal subunit+16S rRNA + mRNA<br /> | **[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] - Tt30S ribosomal subunit+16S rRNA + mRNA<br /> | ||
**[[6nqb]], [[6enf]] – Ec30S ribosomal subunit +16S rRNA – | **[[6nqb]], [[6enf]] – Ec30S ribosomal subunit +16S rRNA – Escherichia coli<br /> | ||
**[[6spc]], [[6spg]], [[6spe]], [[6spf]], [[6spb]] – Pa30S ribosomal subunit +16S RRNA – | **[[6w6k]], [[6w77]], [[6w7m]], [[6w7n]], [[6w7w]], [[7af5]], [[7af8]], [[7afl]], [[7bod]], [[7boe]], [[7bof]], [[7bog]], [[7boh]], [[7boi]], [[7nar]], [[7nas]], [[7nat]], [[7nau]], [[7nav]], [[7nax]], [[7oe0]], [[7oe1]] - Ec30S - Cryo EM<br /> | ||
**[[5xyu]], [[5o5j]] - Ms30S ribosomal subunit – | **[[6wu9]], [[6wua]], [[6wub]] - Ef30S – Enterococcus faecalis - Cryo EM<br /> | ||
**[[5xxu]] - 30S ribosomal subunit – | **[[6spc]], [[6spg]], [[6spe]], [[6spf]], [[6spb]] – Pa30S ribosomal subunit +16S RRNA – Pseudomonas aeruginosa – Cryo EM<br /> | ||
**[[5xyu]], [[5o5j]] - Ms30S ribosomal subunit – Mycobacterium smegmatis - Cryo EM<br /> | |||
**[[5xxu]] - 30S ribosomal subunit – Toxoplasma gondii - Cryo EM<br /> | |||
**[[6v3e]], [[6ys5]], [[6yt9]] – Ab30S – Acinetobacter baumannii - Cryo EM<br /> | |||
**[[7bgd]], [[7bge]], [[7kwg]] – Sa30S – Staphylococcus aureus - Cryo-EM<br /> | |||
*30S subunit +tRNA+mRNA | *30S subunit +tRNA+mRNA | ||
**[[6vu3]] – Ec30S + mRNA - Cryo EM<br /> | |||
**[[3t1h]], [[3t1y]] - Tt30S ribosomal subunit+16S rRNA+tRNA Lys +mRNA<br /> | **[[3t1h]], [[3t1y]] - Tt30S ribosomal subunit+16S rRNA+tRNA Lys +mRNA<br /> | ||
**[[6dti]], [[6mkn]] - Tt30S ribosomal subunit+16S rRNA+tRNA Arg +mRNA<br /> | **[[6dti]], [[6mkn]] - Tt30S ribosomal subunit+16S rRNA+tRNA Arg +mRNA<br /> | ||
**[[ | **[[3v6u]], [[3v6v]] - Tt30S ribosomal subunit+16S rRNA+tRNA Phe+tRNA fMet+mRNA<br /> | ||
**[[1xnq]], [[1xnr]] - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S rRNA<br /> | **[[1xnq]], [[1xnr]] - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S rRNA<br /> | ||
| Line 32: | Line 36: | ||
**[[1n32]], [[1n33]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S rRNA<br /> | **[[1n32]], [[1n33]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S rRNA<br /> | ||
**[[1n34]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment +16S rRNA<br /> | **[[1n34]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment +16S rRNA<br /> | ||
**[[1xmo]], | **[[1xmo]], 1xmq]] - Tt30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S rRNA<br /> | ||
**[[2uxb]] - Tt30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S rRNA<br /> | **[[2uxb]] - Tt30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S rRNA<br /> | ||
*30S subunit+P-site tRNA | *30S subunit+P-site tRNA | ||
**[[1ibk]] - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S rRNA<br /> | **[[1ibk]] - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S rRNA<br /> | ||
**[[2om7]] – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S rRNA fragment+23S RRNA fragment<br /> | **[[2om7]] – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S rRNA fragment+23S RRNA fragment<br /> | ||
**[[5u4j]] – EcRPS3+EcRPS4+EcRPS5 + EcRPS12 + P-site tRNA+16S rRNA +23S rRNA + mRNA + RF-2 – Cryo EM<br /> | **[[5u4j]] – EcRPS3+EcRPS4+EcRPS5 + EcRPS12 + P-site tRNA+16S rRNA +23S rRNA + mRNA + RF-2 – Cryo EM<br /> | ||
| Line 54: | Line 59: | ||
**[[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[4dr3]], [[6cap]], [[6car]] - Tt30S ribosomal subunit+16S rRNA+antibiotic<br /> | **[[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[4dr3]], [[6cap]], [[6car]] - Tt30S ribosomal subunit+16S rRNA+antibiotic<br /> | ||
**[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - Tt30S ribosomal subunit+16S rRNA+mRNA fragment+antibiotic <br /> | **[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]], [[7dug]], [[7duh]] [[7dui]], [[7duj]], [[7duk]], [[7dul]] - Tt30S ribosomal subunit+16S rRNA+mRNA fragment+antibiotic <br /> | ||
**[[ | **[[3knj]], [[3knh]] - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S rRNA+ antibiotic<br /> | ||
**[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br /> | **[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br /> | ||
**[[6ypu]], [[6ytf]], [[7m4u]] – Ab30S + antibiotic - Cryo EM<br /> | |||
*30S subunit + ribosome recycling factor | *30S subunit + ribosome recycling factor | ||
**[[ | **[[3r8n]], [[3r8o]] - Ec30S ribosomal subunit+16S rRNA+ribosome recycling factor + mRNA + tRNA <br /> | ||
*30S subunit + elongation factor | *30S subunit + elongation factor | ||
**[[ | **[[4btc]] - Tt30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor G<br /> | ||
**[[6enu]] - Ec30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor P – Cryo EM<br /> | **[[6enu]] - Ec30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor P – Cryo EM<br /> | ||
| Line 82: | Line 89: | ||
**[[5uz4]], [[5no3]], [[5no2]] - Ec30S ribosomal subunit+ BS6 + US7 + GTPase RsgA +16S rRNA – Cryo EM<br /> | **[[5uz4]], [[5no3]], [[5no2]] - Ec30S ribosomal subunit+ BS6 + US7 + GTPase RsgA +16S rRNA – Cryo EM<br /> | ||
**[[6awb]], [[6awc]], [[6awd]] - Ec30S ribosomal subunit + RNA polymerase - Cryo EM<br /> | **[[6awb]], [[6awc]], [[6awd]] - Ec30S ribosomal subunit + RNA polymerase - Cryo EM<br /> | ||
**[[7o5h]] - Ec30S + KsgA - Cryo EM<br /> | |||
**[[6dzk]] - Ms30S ribosomal subunit + HPF +16S rRNA - Cryo EM<br /> | **[[6dzk]] - Ms30S ribosomal subunit + HPF +16S rRNA - Cryo EM<br /> | ||
**[[6tmf]] - 30S ribosomal subunit + RNA-binding protein + L7AE + L41E + ATPase +16S rRNA – | **[[6tmf]] - 30S ribosomal subunit + RNA-binding protein + L7AE + L41E + ATPase +16S rRNA – Thermococcus celer - Cryo EM<br /> | ||
*40S ribosomal subunit | *40S ribosomal subunit | ||
**[[6g4s]], [[6g53]], [[6g18]], [[6g51]], [[6g5i]] - h40S ribosomal subunit - Cryo-EM<br /> | **[[6g4s]], [[6g53]], [[6g18]], [[6g51]], [[6g5i]], [[6zuo]], [[6zv6]], [[6zxd]], [[6zxe]], [[6zxf]], [[6zxg]], [[6zxh]] - h40S ribosomal subunit - Cryo-EM<br /> | ||
**[[6nd4]], [[6rbd]], [[5wlc]], [[5tzs]]- y40S ribosomal subunit – yeast - Cryo-EM<br /> | **[[6nd4]], [[6rbd]], [[5wlc]], [[5tzs]]- y40S ribosomal subunit – yeast - Cryo-EM<br /> | ||
| Line 96: | Line 104: | ||
**[[6g4w]] - h40S ribosomal subunit + PNO1 + bystin + TSR1 + tRNA methyltransferase - Cryo-EM<br /> | **[[6g4w]] - h40S ribosomal subunit + PNO1 + bystin + TSR1 + tRNA methyltransferase - Cryo-EM<br /> | ||
**[[6g5h]] - h40S ribosomal subunit + RACK1 - Cryo-EM<br /> | **[[6g5h]] - h40S ribosomal subunit + RACK1 - Cryo-EM<br /> | ||
**[[6zlw]], [[6zmt]], [[6zn5]], [[6zoj]], [[6zok]], [[6zol]], [[7k5i]] - h40S + SARS Nsp1 - Cryo-EM<br /> | |||
**[[5vyc]] - h40S ribosomal subunit + DENR-MCT-1 - Cryo-EM<br /> | **[[5vyc]] - h40S ribosomal subunit + DENR-MCT-1 - Cryo-EM<br /> | ||
**[[4kzx]] - r40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM<br /> | **[[4kzx]] - r40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM<br /> | ||
**[[4kzy]] - r40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM<br /> | **[[4kzy]] - r40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM<br /> | ||
**[[4kzz]] - r40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM<br /> | **[[4kzz]] - r40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM<br /> | ||
**[[6p4g]], [[6p4h]] - r40S ribosomal subunit + IRES virus | **[[6p4g]], [[6p4h]], [[6w2s]], [[6w2t]] - r40S ribosomal subunit + virus IRES – Cryo-EM<br /> | ||
**[[7jqb]] - r40S + SARS Nsp1 - Cryo-EM<br /> | |||
**[[7jqc]] - r40S + SARS Nsp1 + virus IRES - Cryo-EM<br /> | |||
**[[4bts]] - r40S ribosomal subunit+ 18SrRNA + EIF1 + EIF1A <br /> | **[[4bts]] - r40S ribosomal subunit+ 18SrRNA + EIF1 + EIF1A <br /> | ||
**[[6fai]], [[6y7c]] - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 - Cryo-EM<br /> | **[[6fai]], [[6y7c]] - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 - Cryo-EM<br /> | ||
| Line 106: | Line 117: | ||
**[[6eml]] - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 + essential nuclear protein 1 – Cryo-EM<br /> | **[[6eml]] - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 + essential nuclear protein 1 – Cryo-EM<br /> | ||
**[[6rbe]], [[6rbd]] - y40S ribosomal subunit + TSR1 – Cryo-EM<br /> | **[[6rbe]], [[6rbd]] - y40S ribosomal subunit + TSR1 – Cryo-EM<br /> | ||
**[[6zvi]] - y40S + Mbf1 – Cryo-EM<br /> | |||
**[[6nd4]] - y40S ribosomal subunit + SOF1 + IMP3 + MPP10 + BUD21 + NOP56 + NOP58 + NOP1 + SNU13 + RRP9 + FAF1 – Cryo-EM<br /> | **[[6nd4]] - y40S ribosomal subunit + SOF1 + IMP3 + MPP10 + BUD21 + NOP56 + NOP58 + NOP1 + SNU13 + RRP9 + FAF1 – Cryo-EM<br /> | ||
**[[4v5o]] - Tet40S ribosomal subunit+RACK1 – | **[[4v5o]] - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila<br /> | ||
**[[5xyi]] - Tv40S ribosomal subunit+ RACK1 – | **[[5xyi]] - Tv40S ribosomal subunit+ RACK1 – Trichomonas vaginalis - Cryo-EM<br /> | ||
**[[5opt]] – Tc40S ribosomal subunit + KSRP – | **[[5opt]] – Tc40S ribosomal subunit + KSRP – Trypanosoma cruzi - Cryo-EM<br /> | ||
**[[6okk]] – Pf40S ribosomal subunit + antibiotics – | **[[6okk]] – Pf40S ribosomal subunit + antibiotics – Plasmodium falciparum - Cryo-EM<br /> | ||
*43S preinitiation | |||
**[[6zvj]], [[7a09]] – h43S + ABCE-1 - Cryo_EM<br /> | |||
**[[6zon]], [[6zp4]] – h43S + SARS Nsp1 - Cryo_EM<br /> | |||
**[[6zce]], [[7a1g]] – y43S + ABCE-1 - Cryo_EM<br /> | |||
**[[7ase]] – Tc43S + helicase - Cryo_EM<br /> | |||
*48S preinitiation | *48S preinitiation | ||
**[[6fec]] – h48S - Cryo_EM<br /> | **[[6fec]], [[6ybs]], [[6ybw]], [[6zmw]] – h48S - Cryo_EM<br /> | ||
**[[6ybd]] – h48S + eIF3 - Cryo_EM<br /> | |||
**[[6yal]], [[6yan]] – r48S + IF-3 + mRNA - Cryo_EM<br /> | |||
**[[6yam]] – r48S + mRNA - Cryo_EM<br /> | |||
**[[6gsm]], [[6gsn]] – y48S - Cryo_EM<br /> | **[[6gsm]], [[6gsn]] – y48S - Cryo_EM<br /> | ||
**[[6fyx]], [[6fyy]] – y48S + IF-5 - Cryo_EM<br /> | **[[6fyx]], [[6fyy]] – y48S + IF-5 - Cryo_EM<br /> | ||
**[[6zu9]] – y48S + ABCE-1 - Cryo_EM<br /> | |||
*50S subunit | *50S subunit | ||
**[[2ftc]] – b50S subunit – bovine - Cryo_EM<br /> | **[[2ftc]] – b50S subunit – bovine - Cryo_EM<br /> | ||
**[[5x8t]] – s50S ribosomal subunit - Cryo-EM<br /> | **[[5x8t]] – s50S ribosomal subunit - Cryo-EM<br /> | ||
**[[ | **[[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3v6w]], [[3v6x]], [[3zne]], [[4k0m]], [[4k0q]] - Tt50S subunit <br /> | ||
**[[ | **[[3i1n]], [[3i1p]] - Ec50S subunit<br /> | ||
**[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]] - Ec50S subunit - Cryo_EM<br /> | **[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]], [[6wnt]], [[7bv8]], [[7lv0]], [[7lvk]] - Ec50S subunit - Cryo_EM<br /> | ||
**[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – | **[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – Deinococcus radiodurans<br /> | ||
**[[2qa4]], [[3cc2]], [[1s72]], [[4v9f]], [[1kqs]], 1qvg, [[1jj2]], [[1ffk]], [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]], [[1yj9]] - Hm50S subunit – | **[[2qa4]], [[3cc2]], [[1s72]], [[4v9f]], [[1kqs]], 1qvg, [[1jj2]], [[1ffk]], [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]], [[1yj9]] - Hm50S subunit – Haloarcula marismortui<br /> | ||
**[[3iy9]] – | **[[3iy9]] – Lm50S subunit - Leishmania major<br /> | ||
**[[3j3v]], [[3j3w]] - Bs50S subunit – | **[[7am2]] – Lm50S + ATP + GTP – Cryo EM<br /> | ||
**[[3j3v]], [[3j3w]] - Bs50S subunit – Bacillus subtilis<br /> | |||
**[[6ppf]], [[6pvk]] – Bs50S subunit – Cryo-EM<br /> | **[[6ppf]], [[6pvk]] – Bs50S subunit – Cryo-EM<br /> | ||
**[[6spd]] – Pa50S subunit – Cryo-EM<br /> | **[[6spd]] – Pa50S subunit – Cryo-EM<br /> | ||
**[[6s12]], [[6hma]] – Sa50S | **[[6s12]], [[6hma]], [[7asm]], [[7asn]], [[7aso]] – Sa50S - Cryo-EM<br /> | ||
**[[5zet]], [[6dzp]], [[5o60]], [[5xym]] – Ms50S ribosomal subunit - Cryo EM<br /> | **[[5zet]], [[6dzp]], [[5o60]], [[5xym]] – Ms50S ribosomal subunit - Cryo EM<br /> | ||
**[[6v3d]] – Ab50S - Cryo EM<br /> | |||
*50S subunit + antibiotics | *50S subunit + antibiotics | ||
**[[7a0r]], [[7a18]] - Dr50S + antibiotic<br /> | |||
**[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - Dr50S subunit +general stress protein Ctc+ antibiotic<br /> | **[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - Dr50S subunit +general stress protein Ctc+ antibiotic<br /> | ||
[[4io9]], [[4ioa]], [[4ioc]] - Dr50S subunit + antibiotics<br /> | |||
**[[6u48]] - Ec50S subunit + antibiotics<br /> | **[[6u48]] - Ec50S subunit + antibiotics<br /> | ||
**[[6pc5]], [[6wyv]], [[6xz7]], [[6xza]], [[6xzb]] - Ec50S + antibiotics – Cryo EM<br /> | |||
**[[6qul]] - Ec50S subunit + P-site tRNA-fMet + antibiotics<br /> | **[[6qul]] - Ec50S subunit + P-site tRNA-fMet + antibiotics<br /> | ||
**[[6az1]], [[6az3]] – | **[[6az1]], [[6az3]] – Lm50S subunit + antibiotics – Cryo EM<br /> | ||
**[[6s0z]], [[6ddd]], [[6ddg]] – Sa50S subunit + antibiotics – Cryo EM<br /> | **[[6s0z]], [[6ddd]], [[6ddg]], [[6wqn]], [[6wqq]], [[6wrs]] – Sa50S subunit + antibiotics – Cryo EM<br /> | ||
**[[3i55]] [[3i56]] , [[3g4s]], [[3g4e]], [[3g71]], [[2qex]], [[3cc4]], [[3cd6]], [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]], [[2otj]], [[2otl]], [[1yit]], [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cpw]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]], [[3cxc]] - Hm50S subunit + antibiotics<br /> | **[[3i55,]] [[3i56]] , [[3g4s]], [[3g4e]], [[3g71]], [[2qex]], [[3cc4]], [[3cd6]], [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]], [[2otj]], [[2otl]], [[1yit]], [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cpw]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]], [[3cxc]] - Hm50S subunit + antibiotics<br /> | ||
**[[5v7q]] – Mt50S subunit + antibiotic – | **[[5v7q]] – Mt50S subunit + antibiotic – Mycobacterium tuberculosis – Cryo EM<br /> | ||
**[[6yhs]], [[6ysi]], [[7m4v]] – Ab50S + antibiotic - Cryo EM<br /> | |||
*50S subunit + ribosome releasing factor (RRF) | *50S subunit + ribosome releasing factor (RRF) | ||
**[[2rdo]] - Ec50S subunit +EF-G+RRF – Cryo-EM<br /> | **[[2rdo]] - Ec50S subunit +EF-G+RRF – Cryo-EM<br /> | ||
**[[3j0d]] - Tt50S subunit+RRF – Cryo-EM<br /> | **[[3j0d]] - Tt50S subunit+RRF – Cryo-EM<br /> | ||
*50S subunit + various proteins | *50S subunit + various proteins | ||
**[[2j28]] - Ec50S subunit +signal recognition particle – Cryo-EM<br /> | **[[2j28]] - Ec50S subunit +signal recognition particle – Cryo-EM<br /> | ||
| Line 157: | Line 186: | ||
**[[5o2r]] - Ec50S subunit + antimicrobial peptide – Cryo-EM<br /> | **[[5o2r]] - Ec50S subunit + antimicrobial peptide – Cryo-EM<br /> | ||
**[[5ot7]] - Ec50S subunit + EF-G – Cryo-EM<br /> | **[[5ot7]] - Ec50S subunit + EF-G – Cryo-EM<br /> | ||
**[[6ys3]] - Ec50S + peptide – Cryo-EM<br /> | |||
**[[7bl2]], [[7bl3]] - Ec50S + ObgE – Cryo-EM<br /> | |||
**[[7bl6]] - Ec50S+ ObgE + GMPPNP – Cryo-EM<br /> | |||
**[[7bl4]] - Ec50S + ObgE + GMPPNP + RsfS – Cryo-EM<br /> | |||
**[[1w2b]] - Hm50S subunit +trigger factor N-terminal<br /> | **[[1w2b]] - Hm50S subunit +trigger factor N-terminal<br /> | ||
**[[1qvf]]- Hm50S subunit + deacylated tRNA minihelix<br /> | **[[1qvf]]- Hm50S subunit + deacylated tRNA minihelix<br /> | ||
** | **[1q86]] - Hm50S subunit +CCA-Phe-caproic acid-biotin<br /> | ||
**[[3cma]], [[3cme]], [[1vq8]], [[1vq9]], [[1m90]] - Hm50S subunit +CCA+CCA-Phe-CAP-BIO<br /> | **[[3cma]], [[3cme]], [[1vq8]], [[1vq9]], [[1m90]] - Hm50S subunit +CCA+CCA-Phe-CAP-BIO<br /> | ||
**[[1vq4]], [[1vq5]], [[1vq7]], [[1vql]], [[1vqm]], [[1vqp]] – Hm50S subunit +transition state analog<br /> | **[[1vq4]], [[1vq5]], [[1vq7]], [[1vql]], [[1vqm]], [[1vqp]] – Hm50S subunit +transition state analog<br /> | ||
| Line 168: | Line 201: | ||
**[[6htq]] - Bs50S subunit + RelA – Cryo EM<br /> | **[[6htq]] - Bs50S subunit + RelA – Cryo EM<br /> | ||
**[[6szs]] - Bs50S subunit + BrfA – Cryo EM<br /> | **[[6szs]] - Bs50S subunit + BrfA – Cryo EM<br /> | ||
**[[7aqc]], [[7aqd]], [[7as8]], [[7as9]], [[7ope]] - Bs50S + tRNA + Rqc – Cryo EM<br /> | |||
**[[7kgb]] - Mt50S + SEQ-9 – Cryo EM<br /> | |||
*60S subunit | *60S subunit | ||
| Line 176: | Line 211: | ||
**[[5xy3]] – Tv60S ribosomal subunit - Cryo-EM<br /> | **[[5xy3]] – Tv60S ribosomal subunit - Cryo-EM<br /> | ||
**[[5t5h]] – Tc60S ribosomal subunit - Cryo-EM<br /> | **[[5t5h]] – Tc60S ribosomal subunit - Cryo-EM<br /> | ||
**[[6yxy]] – Tb60S - Cryo-EM<br /> | |||
*60S subunit + various proteins | *60S subunit + various proteins | ||
**[[ | **[[3j3b]] – h60S subunit + P0 + P1 + P2 - Cryo EM<br /> | ||
**[[ | **[[3izs]] – y60S subunit + P0 + P1 + P2 - Cryo EM<br /> | ||
**[[4v8t]] – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br /> | **[[4v8t]] – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br /> | ||
**[[ | **[[3o5h]] – y60S subunit + 5S rRNA + 5.8S rRNA + 25S rRNA + P0<br /> | ||
**[[6em5]], [[6em4]], [[6em3]], [[6elz]], [[6em1]] – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM<br /> | **[[6em5]], [[6em4]], [[6em3]], [[6elz]], [[6em1]] – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM<br /> | ||
**[[6cb1]], [[6c0f]], [[5z3g]] – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM<br /> | **[[6cb1]], [[6c0f]], [[5z3g]] – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM<br /> | ||
| Line 188: | Line 224: | ||
**[[5t6r]], [[5t62]] – y60S subunit + Nmd3 – Cryo EM<br /> | **[[5t6r]], [[5t62]] – y60S subunit + Nmd3 – Cryo EM<br /> | ||
**[[6ft6]] – y60S ribosomal subunit + NOP53 – Cryo-EM<br /> | **[[6ft6]] – y60S ribosomal subunit + NOP53 – Cryo-EM<br /> | ||
**[[6ylg]], [[6ylh]], [[6ylx]], [[6yly]], [[7bl5]], [[7bt6]], [[7btb]] – ypre-60S – Cryo-EM<br /> | |||
**[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br /> | **[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br /> | ||
**[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br /> | **[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br /> | ||
**[[ | **[[3j39]] – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM<br /> | ||
**[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br /> | **[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br /> | ||
| Line 197: | Line 234: | ||
**[[4v61]], [[5x8p]], [[5mlc]] – sRibosome - Cryo-EM<br /> | **[[4v61]], [[5x8p]], [[5mlc]] – sRibosome - Cryo-EM<br /> | ||
**[[4v4q]], [[4v9d]], [[6c4i]], [[6c4h]], [[6by1]] - EcRibosome <br /> | **[[4v4q]], [[4v9d]], [[6c4i]], [[6c4h]], [[6by1]] - EcRibosome <br /> | ||
**[[5uyq]], [[5uyk]], [[5uyl]], [[5uym]], [[5uyn]], [[5uyp]], [[5uyq]], [[6o9j]], [[6o9k]], [[6ore]], [[6orl]], [[6hrm]], [[4v69]], [[4v48]], [[4v4a]], [[6bu8]] – EcRibosome - Cryo-EM<br /> | **[[5uyq]], [[5uyk]], [[5uyl]], [[5uym]], [[5uyn]], [[5uyp]], [[5uyq]], [[6o9j]], [[6o9k]], [[6ore]], [[6orl]], [[6hrm]], [[4v69]], [[4v48]], [[4v4a]], [[6bu8]], [[6wnv]], [[6wnw]], [[6ysr]], [[6ztn]], [[6zto]], [[6ztp]], [[6ztm]], [[6zu1]], [[7abz]], [[7ac7]], [[7acj]], [[7acr]], [[7cpj]], [[7k00]], [[[7n1p]], [7n2u]], [[7n30]], [[7n31]], [[7oi0]], [[7oif]], [[7oig]], [[7oii]], [[7ot5]] – EcRibosome - Cryo-EM<br /> | ||
**[[4v6c]], [[4v6d]], [[4v6e]] – EcRibosome ratcheting<br /> | **[[4v6c]], [[4v6d]], [[4v6e]] – EcRibosome ratcheting<br /> | ||
**[[4v4v]] – EcRibosome pre-translocational – Cryo-EM<br /> | **[[4v4v]] – EcRibosome pre-translocational – Cryo-EM<br /> | ||
| Line 211: | Line 248: | ||
**[[4v5n]] – TtRibosome post-translocational – Cryo-EM<br /> | **[[4v5n]] – TtRibosome post-translocational – Cryo-EM<br /> | ||
**[[5v8i]] – TtRibosome – rps17 <br /> | **[[5v8i]] – TtRibosome – rps17 <br /> | ||
**[[4v8m]] - TbRibosome – | **[[4v8m]] - TbRibosome – Trypanosoma brucei - Cryo-EM<br /> | ||
**[[4v6u]] – Ribosome – | **[[4v6u]] – Ribosome – Pyrococcus furiosus - Cryo-EM<br /> | ||
**[[5zep]], [[5zeb]], [[5o61]] – MsRibosome - Cryo-EM<br /> | **[[5zep]], [[5zeb]], [[5o61]] – MsRibosome - Cryo-EM<br /> | ||
**[[5tcu]], [[6s13]], [[5t7v]] – SaRibosome - Cryo-EM<br /> | **[[5tcu]], [[6s13]], [[5t7v]], [[6yef]], [[7asp]], [[7nhl]], [[7nhm]] – SaRibosome - Cryo-EM<br /> | ||
**[[6rm3]] - Ribosome – | **[[6rm3]] - Ribosome – Valrimorpha necatrix - Cryo-EM<br /> | ||
**[[6w6p]] - EfRibosome - Cryo-EM<br /> | |||
**[[7o5b]] - BsRibosome - Cryo-EM<br /> | |||
**[[7qep]] - Ribosome – Encephalitozoon cuniculi - Cryo-EM<br /> | |||
**[[6v3b]] – AbRibosome - Cryo EM<br /> | |||
**[[7jil]] – Ribosome – Flavobacterium johnsoniae - Cryo EM<br /> | |||
*70S ribosome complex with mRNA | *70S ribosome complex with mRNA | ||
**[[4v50]] – EcRibosome + mRNA<br /> | **[[4v50]] – EcRibosome + mRNA<br /> | ||
**[[4v6n]], [[4v6o]], [[4v6p]], [[4v6q]], [[4v6r]], [[4v6s]] – EcRibosome + mRNA – Cryo-EM<br /> | **[[4v6n]], [[4v6o]], [[4v6p]], [[4v6q]], [[4v6r]], [[4v6s]], [[6vyu]], [[6vz3]], [[6vzj]], [[7jss]], [[7jsw]], [[7jsz]] – EcRibosome + mRNA – Cryo-EM<br /> | ||
**[[6vyz]] – EcRibosome + mRNA + NusA + P-tRNA + E-tRNA – Cryo-EM<br /> | |||
**[[6vyq]], [[6vyr]], [[6vys]], [[6vyt]], [[6vyw]], [[6vyx]], [[6vyy]], [[6vz2]], [[6vz5]], [[6vz7]], [[6xgf]], [[6xii]], [[6xij]], [[6ztj]] – EcRibosome + mRNA + NusG + tRNA – Cryo-EM<br /> | |||
**[[6x6t]], [[6x7f]], [[6x7k]], [[6x9q]], [[6xdq]], [[6xdr]] – EcRibosome + mRNA + NusA + NusG + P-tRNA + E-tRNA – Cryo-EM<br /> | |||
**[[6ysu]], [[7jt2]] – EcRibosome + mRNA + ArfB-2 – Cryo-EM<br /> | |||
**[[7jt1]], [[7jt3]] – EcRibosome + mRNA + ArfB-1 + ArfB-2 – Cryo-EM<br /> | |||
**[[4v6f]], [[4v6g]] , [[4v87]], [[4v8b]] , [[4v8d]], [[4v8e]], [[4v9i]] – TtRibosome + mRNA<br /> | **[[4v6f]], [[4v6g]] , [[4v87]], [[4v8b]] , [[4v8d]], [[4v8e]], [[4v9i]] – TtRibosome + mRNA<br /> | ||
**[[4v4t]] – TtRibosome + stop codon<br /> | **[[4v4t]] – TtRibosome + stop codon<br /> | ||
| Line 228: | Line 275: | ||
**[[4v52]], [[4v53]], [[4v56]], [[4v57]], [[4v64]], [[4v4h]], [[4v7s]], [[4v7t]], [[4v7u]], [[4v7v]], [[4www]] – EcRibosome + antibiotic<br /> | **[[4v52]], [[4v53]], [[4v56]], [[4v57]], [[4v64]], [[4v4h]], [[4v7s]], [[4v7t]], [[4v7u]], [[4v7v]], [[4www]] – EcRibosome + antibiotic<br /> | ||
**[[6y69]], [[6y6x]], [[7n2v]], [[7s1g]], [[7s1h]], [[7s1k]] – EcRibosome + antibiotic – Cryo EM<br /> | |||
**[[7b5k]], [[7nso]], [[7nsq]], [[7nsq]] – EcRibosome + tRNA + antibiotic – Cryo EM<br /> | |||
**[[6b4v]] – EcRibosome + RF-1 + antibiotic<br /> | **[[6b4v]] – EcRibosome + RF-1 + antibiotic<br /> | ||
**[[4v55]], [[4v5y]] – EcRibosome + antibiotic + RRF<br /> | **[[4v55]], [[4v5y]] – EcRibosome + antibiotic + RRF<br /> | ||
**[[4v51]], [[4v5c]], [[4v5d]], [[4v7w]], [[4v7x]], [[4v7y]], [[4v7z]], [[4v8a]], [[4v9c]], [[6czr]] – TtRibosome + antibiotic<br /> | **[[4v51]], [[4v5c]], [[4v5d]], [[4v7w]], [[4v7x]], [[4v7y]], [[4v7z]], [[4v8a]], [[4v9c]], [[6czr]], [[7md7]] – TtRibosome + antibiotic<br /> | ||
**[[4v8c]], [[4v8f]], [[4v9a]], [[4v9b]], [[4v9c]] – TtRibosome + mRNA + antibiotic<br /> | **[[4v8c]], [[4v8f]], [[4v9a]], [[4v9b]], [[4v9c]] – TtRibosome + mRNA + antibiotic<br /> | ||
**[[5w4k]], [[5wis]], [[5wit]], [[6nd5]], [[6nd6]], [[6o97]], [[6of1]], [[6cae]], [[5vp2]] – TtRibosome + A-site tRNA + P | **[[5w4k]], [[5wis]], [[5wit]], [[6nd5]], [[6nd6]], [[6o97]], [[6of1]], [[6cae]], [[5vp2]], [[6xhv]], [[6xhw]], [[6xhy]], [[6xqd]], [[6xqe]], [[7lh5]], [[7rq8]], [[7rq9]] – TtRibosome + tRNA + mRNA + antibiotic<br /> | ||
**[[7rqd]] – TtRibosome + A-site tRNA + P-site tRNA + protein Y + antibiotic<br /> | |||
**[[6boh]] – TtRibosome + RF-1 + antibiotic<br /> | **[[6boh]] – TtRibosome + RF-1 + antibiotic<br /> | ||
**[[4v7l]], [[4v7m]] – Ribosome + antibiotic – | **[[6xhh]] – TtRibosome + protein Y + antibiotic<br /> | ||
**[[4v7l]], [[4v7m]] – Ribosome + antibiotic – Streptomyces puniceus<br /> | |||
**[[5v93]] – MtRibosome + antibiotic – Cryo EM<br /> | **[[5v93]] – MtRibosome + antibiotic – Cryo EM<br /> | ||
**[[6ha1]] – BsRibosome + antibiotic – Cryo EM<br /> | **[[6ha1]] – BsRibosome + antibiotic – Cryo EM<br /> | ||
**[[6s0x]] – SaRibosome + antibiotic – Cryo EM<br /> | **[[6s0x]], [[7p48]] – SaRibosome + antibiotic – Cryo EM<br /> | ||
**[[7m4w]], [[7m4z]], [[7ryh]] – AbRibosome + antibiotic - Cryo EM<br /> | |||
**[[7m4x]], [[7m4y]], [[7ryf]], [[7ryg]] – AbRibosome + antibiotic + tRNA - Cryo EM<br /> | |||
*70S ribosome complex with release factor | *70S ribosome complex with release factor | ||
| Line 249: | Line 302: | ||
**[[4v54]] – EcRibosome + RRF<br /> | **[[4v54]] – EcRibosome + RRF<br /> | ||
**[[6dnc]], [[6osk]], [[6osq]] – EcRibosome + RF-1 – Cryo-EM<br /> | **[[6dnc]], [[6osk]], [[6osq]] – EcRibosome + RF-1 – Cryo-EM<br /> | ||
**[[6ouo]], [[6og7]], [[6ogf]], [[6ogg]], [[6ogi]], [[6ot3]], [[6ost]] – EcRibosome + RF-2 – Cryo-EM<br /> | **[[6ouo]], [[6og7]], [[6ogf]], [[6ogg]], [[6ogi]], [[6ot3]], [[6ost]], [[7oj0]] – EcRibosome + RF-2 – Cryo-EM<br /> | ||
**[[7o1c]] – EcRibosome + RF-2 + Tnac peptide – Cryo-EM<br /> | |||
**[[5u4i]], [[5u9f]], [[5u9g]] – EcRibosome + RF-2 + ArfA – Cryo-EM<br /> | **[[5u4i]], [[5u9f]], [[5u9g]] – EcRibosome + RF-2 + ArfA – Cryo-EM<br /> | ||
**[[4v89]] – EcRibosome + RF-3<br /> | **[[4v89]] – EcRibosome + RF-3<br /> | ||
| Line 260: | Line 314: | ||
**[[4v5b]] – EcRibosome + PDF-binding helix<br /> | **[[4v5b]] – EcRibosome + PDF-binding helix<br /> | ||
**[[4v5h]] – EcRibosome + Tnac leader peptide<br /> | **[[4v5h]] – EcRibosome + Tnac leader peptide<br /> | ||
**[[7pjs]], [[7pjt]] – EcRibosome + tRNA – Cryo EM<br /> | |||
**[[7o1a]], [[7o19]], [[7oiz]], [[7p3k]] – EcRibosome + Tnac leader peptide – Cryo EM<br /> | |||
**[[4v6v]] - EcRibosome+ tetracycline resistance protein + mRNA + P-tRNA – Cryo-EM<br /> | **[[4v6v]] - EcRibosome+ tetracycline resistance protein + mRNA + P-tRNA – Cryo-EM<br /> | ||
**[[6vwl]], [[6vwm]], [[6vwn]] – EcRibosome + HIV FSS – Cryo-EM<br /> | |||
**[[7d6z]] – EcRibosome + peptide deformylase + trigger factor – Cryo-EM<br /> | |||
**[[7d80]] – EcRibosome + peptide deformylase + trigger factor + Met aminopeptidase – Cryo-EM<br /> | |||
**[[4v6m]] – EcRibosome + SecYE – Cryo-EM<br /> | **[[4v6m]] – EcRibosome + SecYE – Cryo-EM<br /> | ||
**[[4v4g]] – EcRibosome + protein Y – Cryo-EM<br /> | **[[4v4g]] – EcRibosome + protein Y – Cryo-EM<br /> | ||
**[[ | **[[7nww]] – EcRibosome + CspA – Cryo-EM<br /> | ||
**[[ | **[[7nwt]] – EcRibosome + virus protein – Cryo-EM<br /> | ||
**[[ | **[[6xe0]], [[6ztl]] – EcRibosome + NusG – Cryo-EM<br /> | ||
**[[4v7i]] – EcRibosome +preprotein translocase – Cryo-EM<br /> | **[[4v7i]] – EcRibosome +preprotein translocase – Cryo-EM<br /> | ||
**[[4v49]] - EcRibosome +general stress protein Ctc – Cryo-EM<br /> | **[[4v49]] - EcRibosome +general stress protein Ctc – Cryo-EM<br /> | ||
| Line 277: | Line 336: | ||
**[[6cfl]] – TtRibosome + Lys-CAM + YfiA<br /> | **[[6cfl]] – TtRibosome + Lys-CAM + YfiA<br /> | ||
**[[6fkr]] – TtRibosome + Tur1A<br /> | **[[6fkr]] – TtRibosome + Tur1A<br /> | ||
**[[7jql]], [[7jqm]] – TtRibosome + mRNA + tRNA + antimicrobial peptide<br /> | |||
**[[5zlu]] – TtRibosome + ABC-F – Cryo-EM<br /> | **[[5zlu]] – TtRibosome + ABC-F – Cryo-EM<br /> | ||
**[[6dzi]] – MsRibosome + MPY – Cryo-EM<br /> | **[[6dzi]] – MsRibosome + MPY – Cryo-EM<br /> | ||
**[[7msc]], [[7msh]], [[7msm]], [[7msz]] – MtRibosome + Etta – Cryo-EM<br /> | |||
**[[7nhn]] – Ribosome + ABCF – Listeria monocytogenes – Cryo-EM<br /> | |||
**[[6v39]], [[6v3a]] – AbRibosome + tRNA – Cryo EM<br /> | |||
**[[7p7u]] - EfRibosome + P-tRNA - Cryo-EM<br /> | |||
**[[7nhk]] – EfRibosome + LsaA – Cryo EM<br /> | |||
**[[7p7q]], [[7p7s]], [[7p7t]] – EfRibosome + ABCF – Cryo-EM<br /> | |||
*70S ribosome complex with tRNA mRNA | *70S ribosome complex with tRNA mRNA | ||
| Line 294: | Line 360: | ||
**[[5uq8]] – TtRibosome + E-site tRNA + dnaX – Cryo-EM<br /> | **[[5uq8]] – TtRibosome + E-site tRNA + dnaX – Cryo-EM<br /> | ||
**[[6cfj]] – TtRibosome + His-CAM + A-site tRNA + P-site tRA + E-site tRNA + mRNA + antibiotic<br /> | **[[6cfj]] – TtRibosome + His-CAM + A-site tRNA + P-site tRA + E-site tRNA + mRNA + antibiotic<br /> | ||
**[[7mt2]], [[7mt3]], [[7mt7]] – MtRibosome + P-tRNA + E-tRNA – Cryo-EM<br /> | |||
**[[7pju]] – EcRibosome + A-tRNA + P-tRNA + E-tRNA – Cryo-EM<br /> | |||
*70S ribosome complex with elongation factor | *70S ribosome complex with elongation factor | ||
**[[4v9o]] – EcRibosome + EF-G<br /> | **[[4v9o]] – EcRibosome + EF-G<br /> | ||
**[[4v47]], [[7k50]], [[7k51]], [[7k52]], [[7k53]], [7k54]], [[7k55]], [[7n2c]] – EcRibosome + EF-G – Cryo-EM<br /> | |||
**[[4v9p]] – EcRibosome + antibiotic + EF-G<br /> | **[[4v9p]] – EcRibosome + antibiotic + EF-G<br /> | ||
**[[ | **[[7pjv]], [[7pjw]], [[7pjx]], [[7pjy]], [[7pjz]] – EcRibosome + A-tRNA + P-tRNA + E-tRNA + EF-G – Cryo-EM<br /> | ||
**[[4v6t]] – EcRibosome + EF-G + tRNA-SmpB – Cryo-EM<br /> | **[[4v6t]] – EcRibosome + EF-G + tRNA-SmpB – Cryo-EM<br /> | ||
**[[4v6k]], [[4v6l]] – EcRibosome + EF-Tu <br /> | **[[4v6k]], [[4v6l]] – EcRibosome + EF-Tu <br /> | ||
**[[5wdt]], [[5we4]], [[6wd0]], [[6wd1]], [[6wd2]], [[6wd3]], [[6wd4]], [[6wd5]], [[6wd6]], [[6wd7]], [[6wd8]], [[6wd9]], [[6wda]], [[6wdb]], [[6wdc]], [[6wdd]], [[6wdf]], [[6wdg]], [[6wdh]], [[6wdi]], [[6wdj]], [[6wdl]], [[6wdm]]– EcRibosome + EF-Tu – Cryo-EM<br /> | |||
**[[4v5l]] – EcRibosome + EF-Tu + tRNA<br /> | **[[4v5l]] – EcRibosome + EF-Tu + tRNA<br /> | ||
**[[5wfk]], [[5wf0]], [[5wfs]] – EcRibosome + EF-Tu + tRNA – Cryo EM<br /> | **[[5wfk]], [[5wf0]], [[5wfs]] – EcRibosome + EF-Tu + tRNA – Cryo EM<br /> | ||
**[[5we6]] – EcRibosome + EF-Tu + tRNA + GTP – Cryo-EM<br /> | |||
**[[6enj]] – EcRibosome + EF-P + A-site tRNA + P-site tRNA – Cryo-EM<br /> | |||
**[[4v5f]], [[4v8u]], [[4v9h]] – TtRibosome + EF-G<br /> | **[[4v5f]], [[4v8u]], [[4v9h]] – TtRibosome + EF-G<br /> | ||
**[[4v56a] – TtRibosome + EF-P<br /> | |||
**[[4v5g]] – TtRibosome + EF-Tu<br /> | **[[4v5g]] – TtRibosome + EF-Tu<br /> | ||
**[[4v8q]] – TtRibosome + antibiotic + EF-Tu<br /> | **[[4v8q]] – TtRibosome + antibiotic + EF-Tu<br /> | ||
| Line 314: | Line 387: | ||
*80S ribosome | *80S ribosome | ||
**[[5t2c]], [[6ip5]], [[6qzp]] – hRibosome - Cryo-EM<br /> | **[[5t2c]], [[6ip5]], [[6ek0]], [[6qzp]], [[6w6l]], [[6y0g]], [[6y2l]], [[6y57]], [[7bhp]] – hRibosome - Cryo-EM<br /> | ||
**[[4v5z]] - dRibosome – dog - Cryo-EM <br /> | **[[4v5z]] - dRibosome – dog - Cryo-EM <br /> | ||
**[[6hcm]], [[6hcq]], [[6sgc]], [[6hcf]], [[6gz3]], [[6gz4]], [[6gz5]] – rRibosome - Cryo-EM<br /> | **[[6hcm]], [[6hcq]], [[6sgc]], [[6hcf]], [[6gz3]], [[6gz4]], [[6gz5]], [[7mdz]], [[7o7y]], [[7o7z]], [[7o81]] – rRibosome - Cryo-EM<br /> | ||
**[[7cpu]], [[7cpv]] - mRibosome - Cryo-EM <br /> | |||
**[[6xu6]], [[6xu7]], [[6xu8]] – DmRibosome - Cryo-EM<br /> | |||
**[[4v7e]] – Ribosome – wheat - Cryo-EM<br /> | **[[4v7e]] – Ribosome – wheat - Cryo-EM<br /> | ||
**[[4v7r]], [[4v88]] – yRibosome <br /> | **[[4v7r]], [[4v88]] – yRibosome <br /> | ||
**[[4v6i]], [[6t7t]], [[6t7i]], [[6t83]], [[6t4q]], [[6i7o]], [[6i7v]] – yRibosome - Cryo-EM<br /> | **[[4v6i]], [[6t7t]], [[6t7i]], [[6t83]], [[6t4q]], [[6i7o]], [[6i7v]], [[6xiq]] – yRibosome - Cryo-EM<br /> | ||
**[[5t2a]] – LdRibosome – | **[[6zj3]] – Ribosome – Euglena gracilis - Cryo-EM<br /> | ||
**[[5t2a]] – LdRibosome – Leishmania donovani - Cryo-EM<br /> | |||
**[[7r81]] – NcRibosome + cycloheximide – Neurospora crassa - Cryo-EM<br /> | |||
**[[7olc]], [[7old]] – CtRibosome – Chaetomium thermophilum - Cryo-EM<br /> | |||
*80S ribosome complexes | *80S ribosome complexes | ||
**[[6r6p]] – hRibosome + XBP1u - Cryo-EM<br /> | **[[6r6p]] – hRibosome + XBP1u - Cryo-EM<br /> | ||
**[[6zvh]] – hRibosome + EDF1 - Cryo-EM<br /> | |||
**[[6z6n]] – hRibosome + EBP1 - Cryo-EM<br /> | |||
**[[6z6m]] – hRibosome + EBP1 +EF-2 + SERBP1 - Cryo-EM<br /> | |||
**[[6z6l]] – hRibosome + CCDC124 - Cryo-EM<br /> | |||
**[[6zm7]] – hRibosome + CCDC124 + EBP1 - Cryo-EM<br /> | |||
**[[6z6e]] – hRibosome + CCDC124 + SARS Nsp1 - Cryo-EM<br /> | |||
**[[6zmi]] – hRibosome + SARS Nsp1 - Cryo-EM<br /> | |||
**[[6zmo]] – hRibosome + EF-1 + SARS Nsp1 - Cryo-EM<br /> | |||
**[[6olg]], [[6oli]] – hRibosome + drug - Cryo-EM<br /> | **[[6olg]], [[6oli]] – hRibosome + drug - Cryo-EM<br /> | ||
**[[6olz]] – hRibosome + tRNA + drug - Cryo-EM<br /> | **[[6olz]], [[6xa1]] – hRibosome + tRNA + drug - Cryo-EM<br /> | ||
**[[6ole]], [[6olf]], [[6om0]], [[6om7]] – hRibosome + A-site tRNA + P-site tRNA + drug - Cryo-EM<br /> | **[[6ole]], [[6olf]], [[6om0]], [[6om7]] – hRibosome + A-site tRNA + P-site tRNA + drug - Cryo-EM<br /> | ||
**[[7nfx]] – hRibosome + SRP + SRP receptor - Cryo-EM<br /> | |||
**[[6fti]], [[6ftj]] - dRibosome + oligosaccharyltransferase + Sec61 - Cryo-EM <br /> | **[[6fti]], [[6ftj]] - dRibosome + oligosaccharyltransferase + Sec61 - Cryo-EM <br /> | ||
**[[6ftg]] - dRibosome + OST - Cryo-EM <br /> | **[[6ftg]] - dRibosome + OST - Cryo-EM <br /> | ||
| Line 333: | Line 420: | ||
**[[6mte]], [[6mtd]] – rRibosome + EF2 + SERBP1 - Cryo-EM<br /> | **[[6mte]], [[6mtd]] – rRibosome + EF2 + SERBP1 - Cryo-EM<br /> | ||
**[[6d9j]], [[6d90]] – rRibosome + RF-1 + P-site tRNA - Cryo-EM<br /> | **[[6d9j]], [[6d90]] – rRibosome + RF-1 + P-site tRNA - Cryo-EM<br /> | ||
**[[7o80]] – rRibosome + RF-1 +ABCE-1 - Cryo-EM<br /> | |||
**[[7nwg]] – rRibosome + A-tRNA + P-site tRNA + E-tRNA + antibiotic- Cryo-EM<br /> | |||
**[[6frk]] – rRibosome + SRP + SRP receptor - Cryo-EM<br /> | **[[6frk]] – rRibosome + SRP + SRP receptor - Cryo-EM<br /> | ||
**[[6hcj]] – rRibosome + A-site tRNA + P-site tRNA - Cryo-EM<br /> | **[[6hcj]] – rRibosome + A-site tRNA + P-site tRNA - Cryo-EM<br /> | ||
| Line 341: | Line 430: | ||
**[[6r7q]] – rRibosome + XBP1u + Sec61 - Cryo-EM<br /> | **[[6r7q]] – rRibosome + XBP1u + Sec61 - Cryo-EM<br /> | ||
**[[6t59]] – rRibosome +b-tubulin- Cryo-EM<br /> | **[[6t59]] – rRibosome +b-tubulin- Cryo-EM<br /> | ||
**[[6p5i]], [[6p5j]], [[6p5k]], [[6p5n]], [[6ip6]], [[6ip8]] - rRibosome + IRES | **[[6z6j]], [[6z6k]] – rRibosome + Lso2 - Cryo-EM<br /> | ||
**[[7nwh]], [[7nwi]] – rRibosome + antibiotic – Cryo EM<br /> | |||
**[[6p5i]], [[6p5j]], [[6p5k]], [[6p5n]], [[6ip6]], [[6ip8]], [[6zvk]], [[7a01]] - rRibosome + IRES – Cryo-EM<br /> | |||
**[[4v6w]] - DmRibosome + EF2 + guanine nucleotide-binding protein – Cryo-EM<br /> | **[[4v6w]] - DmRibosome + EF2 + guanine nucleotide-binding protein – Cryo-EM<br /> | ||
**[[7ls1]], [[7ls2]] – mRibosome + EF2 - Cryo-EM<br /> | |||
**[[7osa]], [[7osm]] – yRibosome + EF2 + GTP<br /> | |||
**[[4v4b]] – yRibosome + EF2 + antifungal - Cryo-EM<br /> | **[[4v4b]] – yRibosome + EF2 + antifungal - Cryo-EM<br /> | ||
**[[6gqv]], [[6gqb]], [[6gq1]] – yRibosome + EF2 + mRNA + tRNA - Cryo-EM<br /> | **[[6gqv]], [[6gqb]], [[6gq1]] – yRibosome + EF2 + mRNA + tRNA - Cryo-EM<br /> | ||
**[[5tga]], [[5tgm]] – yRibosome + A-site tRNA-Pro<br /> | **[[5tga]], [[5tgm]] – yRibosome + A-site tRNA-Pro<br /> | ||
**[[5tbw]], [[5obm]], [[5on6]] – yRibosome + antibiotic <br /> | **[[5tbw]], [[5obm]], [[5on6]] – yRibosome + antibiotic <br /> | ||
**[[7azy]] – yRibosome + antibiotic – Cryo EM<br /> | |||
**[[6hd7]] – yRibosome + NatA – Cryo EM<br /> | **[[6hd7]] – yRibosome + NatA – Cryo EM<br /> | ||
**[[6s47]] – yRibosome + New1 – Cryo EM<br /> | **[[6s47]] – yRibosome + New1 – Cryo EM<br /> | ||
**[[6hhq]] – yRibosome + C45 – Cryo EM<br /> | **[[6hhq]] – yRibosome + C45 – Cryo EM<br /> | ||
**[[6q8y]] – yRibosome + Xrn1 – Cryo EM<br /> | **[[6q8y]] – yRibosome + Xrn1 – Cryo EM<br /> | ||
**[[4v7h]] - TlRibosome+P-site tRNA – | **[[7rr5]] – yRibosome + Rbg1 + Tma46 – Cryo EM<br /> | ||
**[[6xir]] – yRibosome + ubiquitin – Cryo EM<br /> | |||
**[[7of1]], [[7oh3]], [[7ohq]], [[7ohp]], [[7ohr]], [[7ohs]], [[7oht]], [[7ohu]], [[7ohv]], [[7ohw]], [[7ohx]], [[7ohy]] – yRibosome + Nog1-TAP – Cryo EM<br /> | |||
**[[6woo]] – yRibosome + tRNA-Met + eIF5B + GDP – Cryo EM<br /> | |||
**[[7b7d]] – yRibosome + A-tRNA + P-tRNA + EF3 – Cryo EM<br /> | |||
**[[7nrc]], [[7nrd]] – yRibosome + Gcn1 + A-tRNA + P-tRNA + eIF5A + Rbg2 + Gir2 – Cryo EM<br /> | |||
**[[6zu5]] – Ribosome + Lso2 – Paranosema locustae - Cryo-EM<br /> | |||
**[[4v7h]] - TlRibosome+P-site tRNA – Thermomyces lanuginosus<br /> | |||
**[[5umd]] – PfRibosome + mefloquin - Cryo-EM<br /> | **[[5umd]] – PfRibosome + mefloquin - Cryo-EM<br /> | ||
**[[5osg]] – LdRibosome + KSRP - Cryo-EM<br /> | **[[5osg]] – LdRibosome + KSRP - Cryo-EM<br /> | ||
**[[6uz7]] – Ribosome + E-site tRNA + P-site tRNA + IF5B – Kluyveromyces lactis - Cryo-EM<br /> | |||
*90S pre-ribosome | *90S pre-ribosome | ||
**[[5jpq]], [[5oql]], [[5wyj]], [[5wyk]], [[6rxt]], [[6rxu]], [[6rxx]], [[6rxy]], [[6rxz]], [[6rxv]] – pre- | **[[6zqa]], [[6zqb]], [[6zqc]], [[6zqd]], [[6zqe]], [[6zqf]], [[6zqg]], [[7ajt]], [[7aju]], [[7d5s]], [[7d5t]], [[7d63]] - yRibosome - Cryo-EM <br /> | ||
**[[7d4i]] - yRibosome + Dhr1 - Cryo-EM <br /> | |||
**[[5jpq]], [[5oql]], [[5wyj]], [[5wyk]], [[6rxt]], [[6rxu]], [[6rxx]], [[6rxy]], [[6rxz]], [[6rxv]] – pre-CtRibosome - Cryo-EM<br /> | |||
*100S ribosome | *100S ribosome | ||
| Line 365: | Line 469: | ||
**[[6fxc]] - SaRibosome - Cryo-EM <br /> | **[[6fxc]] - SaRibosome - Cryo-EM <br /> | ||
*Mitoribosome | *Mitoribosome or mitochondrial ribosome | ||
*28S subunit | *28S small subunit | ||
**[[6gaz]] – p28S ribosomal subunit – pig - Cryo-EM<br /> | **[[6gaz]] – p28S ribosomal subunit – pig - Cryo-EM<br /> | ||
| Line 373: | Line 477: | ||
**[[6sg9]], [[6sga]], [[6sgb]] – Tb28S ribosomal subunit - Cryo-EM<br /> | **[[6sg9]], [[6sga]], [[6sgb]] – Tb28S ribosomal subunit - Cryo-EM<br /> | ||
**[[6hiy]], [[6hiw]] – Tb28S ribosomal subunit+ IF-3 - Cryo-EM<br /> | **[[6hiy]], [[6hiw]] – Tb28S ribosomal subunit+ IF-3 - Cryo-EM<br /> | ||
**[[6yw5]] – Nc28S - Cryo-EM<br /> | |||
*39S subunit | *39S large subunit | ||
**[[5oom]] – h39S ribosomal subunit - Cryo-EM<br /> | **[[5oom]], [[7od4]], [[7ods]], [[7odt]], [[7of4]], [[7of6]], [[7oi6]], [[7oi7]], [[7oi8]], [[7oi9]], [[7oia]], [[7oib]], [[7oic]], [[7oid]], [[7oie]] – h39S ribosomal subunit - Cryo-EM<br /> | ||
**[[5ool]] – h39S ribosomal subunit + rRNA - Cryo-EM<br /> | **[[5ool]] – h39S ribosomal subunit + rRNA - Cryo-EM<br /> | ||
**[[7o9k]], [[7o9m]], [[7of0]], [[7of2]], [[7of3]], [[7of5]], [[7of7]], [[7pd3]] – h39S + proteins - Cryo EM<br /> | |||
**[[7l20]] – h39S + RRF + EFG2 - Cryo-EM<br /> | |||
**[[7a5h]] – h39S + RF-R + MTRES1 - Cryo-EM<br /> | |||
**[[6gb2]], [[4v19]], [[4v1a]] – p39S ribosomal subunit - Cryo-EM<br /> | **[[6gb2]], [[4v19]], [[4v1a]] – p39S ribosomal subunit - Cryo-EM<br /> | ||
**[[6hix]] – Tb39S ribosomal subunit - Cryo-EM<br /> | **[[7nsh]] – p39S + RRF + EFG2 - Cryo-EM<br /> | ||
**[[6hix]], [[6yxx]], [[7aoi]] – Tb39S ribosomal subunit - Cryo-EM<br /> | |||
**[[7aih]] – Lm39S - Cryo-EM<br /> | |||
**[[6yws]] – Nc39S - Cryo-EM<br /> | |||
*55S mitoribosome | *55S small+large mitoribosome | ||
**[[6nu2]], [[6nu3]] – h55S | **[[6nu2]], [[6nu3]], [[6zs9]], [[7l08]] – h55S + RRF - Cryo EM<br /> | ||
**[[6gaw]], [[5aj4]], [[5aj3]] – p55S | **[[6vlz]], [[6vmi]], [[7a5k]] – h55S + EF-G1 - Cryo EM<br /> | ||
**[[6hiv]] – Tb55S | **[[6ydp]], [[6ydw]] – h55S + tRNAMet + EF-G1 - Cryo EM<br /> | ||
**[[7a5g]] – h55S + EF-Tu + tRNA - Cryo EM<br /> | |||
**[[7a5f]], [[7a5j]], [[7og4]] – h55S + P-tRNA + E-tRNA - Cryo EM<br /> | |||
**[[7a5i]], [[7nsj]] – h55S + tRNA - Cryo EM<br /> | |||
**[[6zm5]], [[6zm6]], [[6zsa]], [[6zsb]], [[6zsc]], [[6zsd]], [[6zse]], [[6zsg]] – h55S + mRNA + tRNA - Cryo EM<br /> | |||
**[[7nql]] – h55S + tRNAMet + ICT1 - Cryo EM<br /> | |||
**[[7nqh]] – h55S + tRNAMet + RF-1 - Cryo EM<br /> | |||
**[[7nsi]] – p55S + RRF + P-tRNA + E-tRNA - Cryo EM<br /> | |||
**[[6gaw]], [[5aj4]], [[5aj3]] – p55S - Cryo-EM<br /> | |||
**[[6xyw]] – 55S – Arabidopsis thaliana - Cryo-EM<br /> | |||
**[[6hiv]] – Tb55S - Cryo-EM<br /> | |||
**[[7ane]] – Lm55S - Cryo-EM<br /> | |||
**[[6z1p]] – Tet55S - Cryo-EM<br /> | |||
**[[6ywe]], [[6ywv]], [[6ywx]], [[6ywy]] – Nc55S + tRNA - Cryo EM<br /> | |||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||