BASIL2022GV3HDT: Difference between revisions

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===='''Pfam'''====
===='''Pfam'''====
We used the FASTA sequence from 3HDT to search in Pfam<ref>Pfam: The protein families database in 2021: J. Mistry, S. Chuguransky, L. Williams, M. Qureshi, G.A. Salazar, E.L.L. Sonnhammer, S.C.E. Tosatto, L. Paladin, S. Raj, L.J. Richardson, R.D. Finn, A. Bateman
We used 3HDT's FASTA sequence to search in Pfam<ref>Pfam: The protein families database in 2021: J. Mistry, S. Chuguransky, L. Williams, M. Qureshi, G.A. Salazar, E.L.L. Sonnhammer, S.C.E. Tosatto, L. Paladin, S. Raj, L.J. Richardson, R.D. Finn, A. Bateman
Nucleic Acids Research (2020) doi: 10.1093/nar/gkaa913</ref> for similar protein families that 3HDT may belong to. Pfam predicted that 3HDT is part of the cytidylate kinase-like family which concurs with the BLASTp results shown previously.  
Nucleic Acids Research (2020) doi: 10.1093/nar/gkaa913</ref> for protein families that 3HDT may belong to. Pfam predicted that 3HDT is part of the cytidylate kinase-like family which concurs with the BLASTp results shown previously.  


[[Image:Pfam search resultsJRAF2022.png |800px| center | thumb | Pfam query aligned with a cytidylate kinase-like family.]]
[[Image:Pfam search resultsJRAF2022.png |800px| center | thumb | Pfam query aligned with a cytidylate kinase-like family.]]