6sja: Difference between revisions

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====

==Structure of HPV16 E6 oncoprotein in complex with IRF3 LxxLL motif==

== Structural highlights ==

<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance].

<table><tr><td colspan='2'>[[6sja]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_papillomavirus_type_16 Human papillomavirus type 16]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SJA OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=6SJA FirstGlance].

</td></tr><tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=6sja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sja OCA], [https://pdbe.org/6sja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sja RCSB], [https://www.ebi.ac.uk/pdbsum/6sja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sja ProSAT]</td></tr>

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=6sja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sja OCA], [https://pdbe.org/6sja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sja RCSB], [https://www.ebi.ac.uk/pdbsum/6sja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sja ProSAT]</td></tr>

</table>

== Function ==

[[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI]] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[[https://www.uniprot.org/uniprot/IRF3_HUMAN IRF3_HUMAN]] Key transcriptional regulator of type I interferon (IFN)-dependent immune responses and plays a critical role in the innate immune response against DNA and RNA viruses. Regulates the transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters. Acts as a more potent activator of the IFN-beta (IFNB) gene than the IFN-alpha (IFNA) gene and plays a critical role in both the early and late phases of the IFNA/B gene induction. Found in an inactive form in the cytoplasm of uninfected cells and following viral infection, double-stranded RNA (dsRNA), or toll-like receptor (TLR) signaling, becomes phosphorylated by IKBKE and TBK1 kinases. This induces a conformational change, leading to its dimerization and nuclear localization and association with CREB binding protein (CREBBP) to form dsRNA-activated factor 1 (DRAF1), a complex which activates the transcription of the type I IFN and ISG genes. Can activate distinct gene expression programs in macrophages and can induce significant apoptosis in primary macrophages.

==See Also==

*[[Maltose-binding protein 3D structures|Maltose-binding protein 3D structures]]

__TOC__

</StructureSection>

[[Category: Escherichia coli]]

[[Category: Homo sapiens]]

[[Category: Human papillomavirus type 16]]

[[Category: Large Structures]]

[[Category: Z-~~disk~~]]

[[Category: Bonhoure A]]

[[Category: Cousido-Siah A]]

[[Category: Mitschler A]]

[[Category: Podjarny A]]

[[Category: Suarez IP]]

[[Category: Trave G]]

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-====
+==Structure of HPV16 E6 oncoprotein in complex with IRF3 LxxLL motif==
-<StructureSection load='6sja' size='340' side='right'caption='[[6sja]]' scene=''>
+<StructureSection load='6sja' size='340' side='right'caption='[[6sja]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6sja]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_papillomavirus_type_16 Human papillomavirus type 16]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SJA FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sja OCA], [https://pdbe.org/6sja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sja RCSB], [https://www.ebi.ac.uk/pdbsum/6sja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sja ProSAT]</span></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sja OCA], [https://pdbe.org/6sja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sja RCSB], [https://www.ebi.ac.uk/pdbsum/6sja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sja ProSAT]</span></td></tr>
 </table>
+== Function ==
+[[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI]] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[[https://www.uniprot.org/uniprot/IRF3_HUMAN IRF3_HUMAN]] Key transcriptional regulator of type I interferon (IFN)-dependent immune responses and plays a critical role in the innate immune response against DNA and RNA viruses. Regulates the transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters. Acts as a more potent activator of the IFN-beta (IFNB) gene than the IFN-alpha (IFNA) gene and plays a critical role in both the early and late phases of the IFNA/B gene induction. Found in an inactive form in the cytoplasm of uninfected cells and following viral infection, double-stranded RNA (dsRNA), or toll-like receptor (TLR) signaling, becomes phosphorylated by IKBKE and TBK1 kinases. This induces a conformational change, leading to its dimerization and nuclear localization and association with CREB binding protein (CREBBP) to form dsRNA-activated factor 1 (DRAF1), a complex which activates the transcription of the type I IFN and ISG genes. Can activate distinct gene expression programs in macrophages and can induce significant apoptosis in primary macrophages.
+==See Also==
+*[[Maltose-binding protein 3D structures|Maltose-binding protein 3D structures]]
 __TOC__
 </StructureSection>
+[[Category: Escherichia coli]]
+[[Category: Homo sapiens]]
+[[Category: Human papillomavirus type 16]]
 [[Category: Large Structures]]
-[[Category: Z-disk]]
+[[Category: Bonhoure A]]
+[[Category: Cousido-Siah A]]
+[[Category: Mitschler A]]
+[[Category: Podjarny A]]
+[[Category: Suarez IP]]
+[[Category: Trave G]]