4dt4: Difference between revisions

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==Crystal structure of the PPIase-chaperone SlpA with the chaperone binding site occupied by the linker of the purification tag==
==Crystal structure of the PPIase-chaperone SlpA with the chaperone binding site occupied by the linker of the purification tag==
<StructureSection load='4dt4' size='340' side='right' caption='[[4dt4]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
<StructureSection load='4dt4' size='340' side='right'caption='[[4dt4]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4dt4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DT4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DT4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4dt4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DT4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DT4 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fkpB, slpA, yaaD, b0028, JW0026 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dt4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dt4 OCA], [https://pdbe.org/4dt4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dt4 RCSB], [https://www.ebi.ac.uk/pdbsum/4dt4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dt4 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dt4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dt4 OCA], [http://pdbe.org/4dt4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dt4 RCSB], [http://www.ebi.ac.uk/pdbsum/4dt4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dt4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/FKBX_ECOLI FKBX_ECOLI]] PPIases accelerate the folding of proteins. Substrate specificity investigated with 'Suc-Ala-Xaa-Pro-Phe-4-nitroanilide' where Xaa is the amino acid tested, was found to be Phe > Leu >> Ile > Lys = Ala > Trp > His >> Gln.  
[[https://www.uniprot.org/uniprot/FKBX_ECOLI FKBX_ECOLI]] PPIases accelerate the folding of proteins. Substrate specificity investigated with 'Suc-Ala-Xaa-Pro-Phe-4-nitroanilide' where Xaa is the amino acid tested, was found to be Phe > Leu >> Ile > Lys = Ala > Trp > His >> Gln.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Peptidyl-prolyl cis-trans isomerase|Peptidyl-prolyl cis-trans isomerase]]
*[[Peptidyl-prolyl cis-trans isomerase 3D structures|Peptidyl-prolyl cis-trans isomerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Escherichia coli K-12]]
[[Category: Peptidylprolyl isomerase]]
[[Category: Large Structures]]
[[Category: Loew, C]]
[[Category: Loew C]]
[[Category: Nordlund, P]]
[[Category: Nordlund P]]
[[Category: Quistgaard, E M]]
[[Category: Quistgaard EM]]
[[Category: Chaperone]]
[[Category: Fkbp domain]]
[[Category: If domain]]
[[Category: Isomerase]]
[[Category: Peptidyl-prolyl isomerase]]
[[Category: Ppiase]]