4fay: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:


==Crystal structure of a trimeric bacterial microcompartment shell protein PduB with glycerol metabolites==
==Crystal structure of a trimeric bacterial microcompartment shell protein PduB with glycerol metabolites==
<StructureSection load='4fay' size='340' side='right' caption='[[4fay]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
<StructureSection load='4fay' size='340' side='right'caption='[[4fay]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4fay]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacrd Lacrd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FAY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FAY FirstGlance]. <br>
<table><tr><td colspan='2'>[[4fay]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Limosilactobacillus_reuteri_subsp._reuteri Limosilactobacillus reuteri subsp. reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FAY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Lreu_1748, PduB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=557436 LACRD])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fay OCA], [https://pdbe.org/4fay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fay RCSB], [https://www.ebi.ac.uk/pdbsum/4fay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fay ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fay OCA], [http://pdbe.org/4fay PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4fay RCSB], [http://www.ebi.ac.uk/pdbsum/4fay PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4fay ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PDUB_LIMRD PDUB_LIMRD] One of the major shell proteins of the bacterial microcompartment (BMC) dedicated to 1,2-propanediol (1,2-PD) degradation (By similarity). Probably involved in a propanediol fermentation/reuterin formation pathway (Probable).[UniProtKB:P37449]<ref>PMID:21379339</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lacrd]]
[[Category: Large Structures]]
[[Category: Pang, A H]]
[[Category: Limosilactobacillus reuteri subsp. reuteri]]
[[Category: Pickersgill, R W]]
[[Category: Pang AH]]
[[Category: Prentice, M B]]
[[Category: Pickersgill RW]]
[[Category: Bmc domain]]
[[Category: Prentice MB]]
[[Category: Glycerol-binding protein]]
[[Category: Shell protein]]