4gv8

DUTPase from phage phi11 of S.aureus: visualization of the species-specific insert

spinqualitylabelsall models 4gv8, resolution 2.10Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 4gv8 is a 6 chain structure with sequence from Staphylococcus virus 11. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: DUP, MG Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function Q8SDV3_BPPHA Publication Abstract from PubMed Genome integrity requires well controlled cellular pools of nucleotides. dUTPases are responsible for regulating cellular dUTP levels and providing dUMP for dTTP biosynthesis. In Staphylococcus, phage dUTPases are also suggested to be involved in a moonlighting function regulating the expression of pathogenicity-island genes. Staphylococcal phage trimeric dUTPase sequences include a specific insertion that is not found in other organisms. Here, a 2.1 A resolution three-dimensional structure of a varphi11 phage dUTPase trimer with complete localization of the phage-specific insert, which folds into a small beta-pleated mini-domain reaching out from the dUTPase core surface, is presented. The insert mini-domains jointly coordinate a single Mg(2+) ion per trimer at the entrance to the threefold inner channel. Structural results provide an explanation for the role of Asp95, which is suggested to have functional significance in the moonlighting activity, as the metal-ion-coordinating moiety potentially involved in correct positioning of the insert. Enzyme-kinetics studies of wild-type and mutant constructs show that the insert has no major role in dUTP binding or cleavage and provide a description of the elementary steps (fast binding of substrate and release of products). In conclusion, the structural and kinetic data allow insights into both the phage-specific characteristics and the generally conserved traits of varphi11 phage dUTPase. Structure and enzymatic mechanism of a moonlighting dUTPase.,Leveles I, Nemeth V, Szabo JE, Harmat V, Nyiri K, Bendes AA, Papp-Kadar V, Zagyva I, Rona G, Ozohanics O, Vekey K, Toth J, Vertessy BG Acta Crystallogr D Biol Crystallogr. 2013 Dec;69(Pt 12):2298-308. doi:, 10.1107/S0907444913021136. Epub 2013 Nov 19. PMID:24311572 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See Also DUTPase 3D structures

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